RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 C5P01031 1676 aa9.07□□□□□ -0.96
HPS4-201ENST00000336873 SPATA31A1Q5TZJ5 1347 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 APBA3O96018 575 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 COPB2P35606 906 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 GNGT1P63211 74 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 BRD3Q15059 726 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 CEP85LQ5SZL2 805 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 FBXO33Q7Z6M2 555 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 SEPT12Q8IYM1 358 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 ADSSL1Q8N142 457 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 OGFOD1Q8N543 542 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 BANK1Q8NDB2 785 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 IKZF4Q9H2S9 585 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 EMILIN3Q9NT22 766 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 ARMCX3Q9UH62 379 aaPredicted RBP9.06□□□□□ -0.96
HPS4-201ENST00000336873 MAD2L2Q9UI95 211 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 GOLGA8IPA6NC78 632 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 GOLGA8JA6NMD2 632 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 GH2P01242 217 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 TRIM14Q14142 442 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 RCSD1Q6JBY9 416 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 ZNF746Q6NUN9 644 aaPredicted RBP9.06□□□□□ -0.96
HPS4-201ENST00000336873 GJB7Q6PEY0 223 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 CLEC4GQ6UXB4 293 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 ERMNQ8TAM6 284 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 CAPN6Q9Y6Q1 641 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 HEXIM1O94992 359 aaKnown RBP9.06□□□□□ -0.96
HPS4-201ENST00000336873 KRT14P02533 472 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 XRCC5P13010 732 aaKnown RBP9.06□□□□□ -0.96
HPS4-201ENST00000336873 WHAMMP3Q1A5X7 153 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 FOXR1Q6PIV2 292 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 HS2ST1Q7LGA3 356 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 PEX26Q7Z412 305 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 MGARPQ8TDB4 240 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 CSRNP1Q96S65 589 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 ADAM33Q9BZ11 813 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 EHD4Q9H223 541 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 PTPN22Q9Y2R2 807 aa9.06□□□□□ -0.96
HPS4-201ENST00000336873 AFF2P51816 1311 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 WDR19Q8NEZ3 1342 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 COL5A2P05997 1499 aaPredicted RBP9.05□□□□□ -0.96
HPS4-201ENST00000336873 NFAT5O94916 1531 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 STXBP3O00186 592 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 EBAG9O00559 213 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 EPHB6O15197 1021 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 PALMO75781 387 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 TTLL1O95922 423 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 PLA2G4BP0C869 781 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 H2AFXP16104 143 aaPredicted RBP9.05□□□□□ -0.96
HPS4-201ENST00000336873 SLCO1A2P46721 670 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 TRAPPC10P48553 1259 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 ZBED6P86452 979 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 PDCLQ13371 301 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 ZNF211Q13398 564 aaPredicted RBP9.05□□□□□ -0.96
HPS4-201ENST00000336873 VWA3BQ502W6 1294 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 PRR5LQ6MZQ0 368 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 KCNK18Q7Z418 384 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 DDX42Q86XP3 938 aaKnown RBP eCLIP9.05□□□□□ -0.96
HPS4-201ENST00000336873 CYP2W1Q8TAV3 490 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 DMGDHQ9UI17 866 aaKnown RBP9.05□□□□□ -0.96
HPS4-201ENST00000336873 RCCD1A6NED2 376 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 NEFHP12036 1026 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 EEF2P13639 858 aaKnown RBP9.05□□□□□ -0.96
HPS4-201ENST00000336873 EEF1GP26641 437 aaKnown RBP9.05□□□□□ -0.96
HPS4-201ENST00000336873 RPS6KA1Q15418 735 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 TMED8Q6PL24 325 aaPredicted RBP9.05□□□□□ -0.96
HPS4-201ENST00000336873 TRIM58Q8NG06 486 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 FLT1P17948 1338 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 ABCC6O95255 1503 aa9.05□□□□□ -0.96
HPS4-201ENST00000336873 LRRIQ3A6PVS8 624 aaPredicted RBP9.04□□□□□ -0.96
HPS4-201ENST00000336873 ZBTB39O15060 712 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 MMP10P09238 476 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 TRIM49P0CI25 452 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 TRIM49CP0CI26 452 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 CHRNA5P30532 468 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 SARSP49591 514 aaKnown RBP9.04□□□□□ -0.96
HPS4-201ENST00000336873 FKBP3Q00688 224 aaKnown RBP9.04□□□□□ -0.96
HPS4-201ENST00000336873 SF3B3Q15393 1217 aaKnown RBP9.04□□□□□ -0.96
HPS4-201ENST00000336873 E2F4Q16254 413 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 CCDC50Q8IVM0 306 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 CCDC51Q96ER9 411 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 ZNF668Q96K58 619 aaPredicted RBP9.04□□□□□ -0.96
HPS4-201ENST00000336873 PLCD4Q9BRC7 762 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 TCHPQ9BT92 498 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 SELENOOQ9BVL4 669 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 FUT8Q9BYC5 575 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 POLLQ9UGP5 575 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 PPIP5K2O43314 1243 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 DLATP10515 647 aaKnown RBP9.04□□□□□ -0.96
HPS4-201ENST00000336873 ALAS1P13196 640 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 SLC9A1P19634 815 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 CDC37Q16543 378 aaPredicted RBP9.04□□□□□ -0.96
HPS4-201ENST00000336873 QRICH1Q2TAL8 776 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 CFAP221Q4G0U5 840 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 PDXDC2PQ6P474 469 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 ZFPM1Q8IX07 1006 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 OR2W6PQ8NHA6 318 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 NUP58Q9BVL2 599 aa9.04□□□□□ -0.96
HPS4-201ENST00000336873 DDX47Q9H0S4 455 aaKnown RBP9.04□□□□□ -0.96
HPS4-201ENST00000336873 CTTNBP2NLQ9P2B4 639 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms