RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ZFP69BQ9UJL9 534 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 ZFYVE9O95405 1425 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 F8W031 263 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 S100A5P33763 92 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 SCRN1Q12765 414 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 TTBK2Q6IQ55 1244 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 PGBD1Q96JS3 809 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 ANO3Q9BYT9 981 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 EHD2Q9NZN4 543 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 BLOC1S6Q9UL45 172 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 GOLGA8CPA6NN73 597 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 CAND2O75155 1236 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 SF3B3Q15393 1217 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 ZNF174Q15697 407 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 SH3GL1Q99961 368 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 C6orf203Q9P0P8 240 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 ZFATQ9P243 1243 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 KNL1Q8NG31 2342 aa11.14□□□□□ -0.63
SPTBN1-201ENST00000333896 GRID2IPA4D2P6 1211 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 TJAP1Q5JTD0 557 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 SYCP2LQ5T4T6 812 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 C1orf146Q5VVC0 180 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 SLC35F6Q8N357 371 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 CARD9Q9H257 536 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 TRIM17Q9Y577 477 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 EIF3DO15371 548 aaKnown RBP eCLIP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 PARP1P09874 1014 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 CENPUQ71F23 418 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 SYT2Q8N9I0 419 aaPredicted RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 OSBPL5Q9H0X9 879 aaPredicted RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 RAB20Q9NX57 234 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 PLEKHG2Q9H7P9 1386 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 STAM2O75886 525 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 MYL1P05976 194 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 UHMK1Q8TAS1 419 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 VCPKMTQ9H867 229 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 SYTL2Q9HCH5 934 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 ZBTB24O43167 697 aaPredicted RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 FAM107AO95990 144 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 MAP4P27816 1152 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 KIF23Q02241 960 aaPredicted RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 HDDC2Q7Z4H3 204 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 PLA2G4DQ86XP0 818 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 TUBGCP3Q96CW5 907 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 MRPL44Q9H9J2 332 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 CABP1Q9NZU7 370 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 SNX5Q9Y5X3 404 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 DTNBO60941 627 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 ROR2Q01974 943 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 SPATA1Q5VX52 437 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 PPHLN1Q8NEY8 458 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 SLC12A5Q9H2X9 1139 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 G3BP2Q9UN86 482 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 LAMC1P11047 1609 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 TMEM191CA6NGB0 347 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 TMEM191BP0C7N4 346 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 RXRAP19793 462 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 ATP8B2P98198 1209 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 POTEAQ6S8J7 498 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 OLFML1Q6UWY5 402 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 MPRIPQ6WCQ1 1025 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 DZIP3Q86Y13 1208 aaKnown RBP11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 SNAPC4Q5SXM2 1469 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 ACTN1P12814 892 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 PPP1R2P3Q6NXS1 205 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 RHPN1Q8TCX5 695 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 FAM129AQ9BZQ8 928 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 MBD2Q9UBB5 411 aa11.13□□□□□ -0.63
SPTBN1-201ENST00000333896 ANO9A1A5B4 782 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 RHOBTB1O94844 696 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 ABCB4P21439 1286 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 S100A1P23297 94 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 CD209Q9NNX6 404 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 ICE1Q9Y2F5 2266 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 CFLARO15519 480 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 DSG1Q02413 1049 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 MAML1Q92585 1016 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 SENP1Q9P0U3 644 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 EXOC7Q9UPT5 735 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 HNRNPRO43390 633 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 FOSL2P15408 326 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 VHLP40337 213 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 RASSF3Q86WH2 238 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 CDKL2Q92772 493 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 CNBD2Q96M20 576 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 TTC25Q96NG3 672 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 FTOQ9C0B1 505 aaKnown RBP eCLIP11.12□□□□□ -0.631e-8■■■□□ 17.8
SPTBN1-201ENST00000333896 ABLIM1O14639 778 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 DEXIO95424 95 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 MORC3Q14149 939 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 LETM2Q2VYF4 491 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 SCYL2Q6P3W7 929 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 PLEKHM3Q6ZWE6 761 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 SPATA21Q7Z572 469 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 CRLF3Q8IUI8 442 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 VSTM4Q8IW00 320 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 GDAP1Q8TB36 358 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 MIEF2Q96C03 454 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 TRAPPC9Q96Q05 1148 aa11.12□□□□□ -0.63
SPTBN1-201ENST00000333896 TEX12Q9BXU0 123 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms