RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 IWS1Q96ST2 819 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 RAB34Q9BZG1 259 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 WDR11Q9BZH6 1224 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 NUP62CLQ9H1M0 184 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 CLSTN2Q9H4D0 955 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 ZFYVE28Q9HCC9 887 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 ADD3Q9UEY8 706 aaKnown RBP13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 PCDHA12Q9UN75 941 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 MAPK4P31152 587 aa13.63□□□□□ -0.23
TRIM49B-201ENST00000332682 MTMR1Q13613 665 aa13.63□□□□□ -0.23
TRIM49B-201ENST00000332682 PDIA5Q14554 519 aa13.63□□□□□ -0.23
TRIM49B-201ENST00000332682 ZSCAN23Q3MJ62 389 aa13.63□□□□□ -0.23
TRIM49B-201ENST00000332682 GPR142Q7Z601 462 aa13.63□□□□□ -0.23
TRIM49B-201ENST00000332682 MMTAG2Q9BU76 263 aaKnown RBP13.63□□□□□ -0.23
TRIM49B-201ENST00000332682 CCSER1Q9C0I3 900 aa13.63□□□□□ -0.23
TRIM49B-201ENST00000332682 KCNH7Q9NS40 1196 aa13.63□□□□□ -0.23
TRIM49B-201ENST00000332682 VAV3Q9UKW4 847 aa13.63□□□□□ -0.23
TRIM49B-201ENST00000332682 THSD7BQ9C0I4 1608 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 MCM3APO60318 1980 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 IPO5O00410 1097 aaKnown RBP13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 POLR2DO15514 142 aaKnown RBP13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 CA12O43570 354 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 STRNO43815 780 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 PSMD10O75832 226 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 STAM2O75886 525 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 RGS20O76081 388 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 ALDH1A1P00352 501 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 ADORA2AP29274 412 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 TXLNAP40222 546 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 UBA7P41226 1012 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 GRB14Q14449 540 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 PDILTQ8N807 584 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 GPRASP2Q96D09 838 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 TIGD1Q96MW7 591 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 ZNF577Q9BSK1 485 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 LRWD1Q9UFC0 647 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 IVNS1ABPQ9Y6Y0 642 aa13.62□□□□□ -0.23
TRIM49B-201ENST00000332682 ACTN4O43707 911 aaKnown RBP13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 SEMA3FQ13275 785 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 KARSQ15046 597 aaKnown RBP13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 STXBP2Q15833 593 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 E2F4Q16254 413 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 CAMK4Q16566 473 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 LONRF3Q496Y0 759 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 LRCH2Q5VUJ6 765 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 PLEKHH3Q7Z736 793 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 CABP7Q86V35 215 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 RIT2Q99578 217 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 PANK2Q9BZ23 570 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 TNMDQ9H2S6 317 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 AGO4Q9HCK5 861 aaKnown RBP13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 DISC1Q9NRI5 854 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 DOCK3Q8IZD9 2030 aa13.61□□□□□ -0.23
TRIM49B-201ENST00000332682 LOC102724159A0A0B4J2E5 919 aa13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 GAS7O60861 476 aa13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 COBLO75128 1261 aa13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 EIF3JO75822 258 aaKnown RBP13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 HTRA3P83110 453 aa13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 ITGB3BPQ13352 177 aaPredicted RBP13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 PPP2R5CQ13362 524 aa13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 PWP2Q15269 919 aaKnown RBP13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 ZNF792Q3KQV3 632 aa13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 B3GNT9Q6UX72 402 aa13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 KRBA2Q6ZNG9 492 aa13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 RBM43Q6ZSC3 357 aaKnown RBP13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 NLRX1Q86UT6 975 aa13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 DHX58Q96C10 678 aa13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 PYM1Q9BRP8 204 aaKnown RBP13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
TRIM49B-201ENST00000332682 SYCE3A1L190 88 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 SLC15A5A6NIM6 579 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 B4DLN1 442 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 DHX15O43143 795 aaKnown RBP13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 PDE4DQ08499 809 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 KRT79Q5XKE5 535 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 NCAPH2Q6IBW4 605 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 OTOP1Q7RTM1 612 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 IQUBQ8NA54 791 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 MORC4Q8TE76 937 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 SNX29Q8TEQ0 813 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 MPHOSPH6Q99547 160 aaKnown RBP13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 NUDT12Q9BQG2 462 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 TEKT3Q9BXF9 490 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 PKD2L1Q9P0L9 805 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 SERTAD1Q9UHV2 236 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 MGAMO43451 1857 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 EML1O00423 815 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 CTAGE5O15320 804 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 MAFGO15525 162 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 ATP9AO75110 1047 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 SLFN14P0C7P3 912 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 PLCG1P19174 1290 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 VEGFBP49765 207 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 ZNF445P59923 1031 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 GRB10Q13322 594 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 GNPTABQ3T906 1256 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 NAALADL2Q58DX5 795 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 PDXDC2PQ6P474 469 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 CNNM3Q8NE01 707 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms