RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 FAM71BQ8TC56 605 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 TUBB2BQ9BVA1 445 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 TANGO6Q9C0B7 1094 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 NHEJ1Q9H9Q4 299 aaPredicted RBP21.13■□□□□ 0.97
LAMP1-201ENST00000332556 HLA-DOAP06340 250 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 HOXA13P31271 388 aaPredicted RBP21.13■□□□□ 0.97
LAMP1-201ENST00000332556 DNM2P50570 870 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 SLC27A3Q5K4L6 730 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 ANKRD13CQ8N6S4 541 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 RAD54LQ92698 747 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 CCDC47Q96A33 483 aaKnown RBP21.13■□□□□ 0.97
LAMP1-201ENST00000332556 CRACR2AQ9BSW2 395 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 GBP3Q9H0R5 595 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 RIC8AQ9NPQ8 531 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 FAM198AQ9UFP1 575 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 ANKRD31Q8N7Z5 1873 aa21.13■□□□□ 0.97
LAMP1-201ENST00000332556 KLRG2A4D1S0 409 aaPredicted RBP21.12■□□□□ 0.97
LAMP1-201ENST00000332556 ZBTB5O15062 677 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 TSR1Q2NL82 804 aaKnown RBP21.12■□□□□ 0.97
LAMP1-201ENST00000332556 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.12■□□□□ 0.97
LAMP1-201ENST00000332556 CUL5Q93034 780 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 PCDHA12Q9UN75 941 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 MYH7BA7E2Y1 1941 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 ZNF263O14978 683 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 AOC3Q16853 763 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 CNNM4Q6P4Q7 775 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 DNAJC7Q99615 494 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 TTYH3Q9C0H2 523 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 SMCHD1A6NHR9 2005 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 AMPD3Q01432 767 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 CERKLQ49MI3 558 aaPredicted RBP21.12■□□□□ 0.97
LAMP1-201ENST00000332556 SIAH1Q8IUQ4 282 aa21.12■□□□□ 0.97
LAMP1-201ENST00000332556 SYF2O95926 243 aaKnown RBP21.11■□□□□ 0.97
LAMP1-201ENST00000332556 IVLP07476 585 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 NPR1P16066 1061 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 RRP1BQ14684 758 aaKnown RBP21.11■□□□□ 0.97
LAMP1-201ENST00000332556 KCTD19Q17RG1 926 aaPredicted RBP21.11■□□□□ 0.97
LAMP1-201ENST00000332556 TRAPPC11Q7Z392 1133 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 C2CD5Q86YS7 1000 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 CERS3Q8IU89 383 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 CYP2W1Q8TAV3 490 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 NLRC4Q9NPP4 1024 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 ESYT2A0FGR8 921 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 POTEFA5A3E0 1075 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 POTEIP0CG38 1075 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 CDC37Q16543 378 aaPredicted RBP21.11■□□□□ 0.97
LAMP1-201ENST00000332556 SLFN13Q68D06 897 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 POTEGQ6S5H5 508 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 POTEEQ6S8J3 1075 aa21.11■□□□□ 0.97
LAMP1-201ENST00000332556 BICDL2A1A5D9 508 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 FXR2P51116 673 aaKnown RBP eCLIP21.1■□□□□ 0.97
LAMP1-201ENST00000332556 USP14P54578 494 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 PSMC6P62333 389 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 TRIM14Q14142 442 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 UNC13DQ70J99 1090 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 CUEDC2Q9H467 287 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 MYO1AQ9UBC5 1043 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 MYBL2P10244 700 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 UBXN2AP68543 259 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 PRR16Q569H4 304 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 WDR93Q6P2C0 686 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 JAKMIP2Q96AA8 810 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 MLXIPQ9HAP2 919 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 SMARCAL1Q9NZC9 954 aa21.1■□□□□ 0.97
LAMP1-201ENST00000332556 MYH4Q9Y623 1939 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 ECE2O60344 883 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 CLK2P49760 499 aaKnown RBP21.09■□□□□ 0.97
LAMP1-201ENST00000332556 CYP4A11Q02928 519 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 CENPPQ6IPU0 288 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 TMC4Q7Z404 712 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 DNAAF5Q86Y56 855 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 NDST4Q9H3R1 872 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 A0A1W2PQC6 194 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 ARID5AQ03989 594 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 COASYQ13057 564 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 ZYXQ15942 572 aaKnown RBP21.09■□□□□ 0.97
LAMP1-201ENST00000332556 RRAGAQ7L523 313 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 IKZF4Q9H2S9 585 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 SAR1BQ9Y6B6 198 aa21.09■□□□□ 0.97
LAMP1-201ENST00000332556 MED24O75448 989 aa21.08■□□□□ 0.97
LAMP1-201ENST00000332556 MYL1P05976 194 aa21.08■□□□□ 0.97
LAMP1-201ENST00000332556 DNA2P51530 1060 aa21.08■□□□□ 0.97
LAMP1-201ENST00000332556 VWA3BQ502W6 1294 aa21.08■□□□□ 0.97
LAMP1-201ENST00000332556 CLRN2A0PK11 232 aa21.08■□□□□ 0.96
LAMP1-201ENST00000332556 EIF3CLB5ME19 914 aaKnown RBP21.08■□□□□ 0.96
LAMP1-201ENST00000332556 TRAF5O00463 557 aa21.08■□□□□ 0.96
LAMP1-201ENST00000332556 MRPL12P52815 198 aaKnown RBP21.08■□□□□ 0.96
LAMP1-201ENST00000332556 TUBB4BP68371 445 aa21.08■□□□□ 0.96
LAMP1-201ENST00000332556 DNAJC19Q96DA6 116 aa21.08■□□□□ 0.96
LAMP1-201ENST00000332556 EIF3CQ99613 913 aaKnown RBP21.08■□□□□ 0.96
LAMP1-201ENST00000332556 RABEP2Q9H5N1 569 aa21.08■□□□□ 0.96
LAMP1-201ENST00000332556 PANK4Q9NVE7 773 aa21.08■□□□□ 0.96
LAMP1-201ENST00000332556 EHD2Q9NZN4 543 aa21.08■□□□□ 0.96
LAMP1-201ENST00000332556 ARHGAP20Q9P2F6 1191 aa21.08■□□□□ 0.96
LAMP1-201ENST00000332556 HPCAL4Q9UM19 191 aa21.08■□□□□ 0.96
LAMP1-201ENST00000332556 BRWD3Q6RI45 1802 aa21.08■□□□□ 0.96
LAMP1-201ENST00000332556 LTBP1Q14766 1721 aa21.07■□□□□ 0.96
LAMP1-201ENST00000332556 PLIN4Q96Q06 1357 aa21.07■□□□□ 0.96
LAMP1-201ENST00000332556 SMARCA1P28370 1054 aa21.07■□□□□ 0.96
LAMP1-201ENST00000332556 ICA1Q05084 483 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms