RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 GOLGA6L1Q8N7Z2 621 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 DRC1Q96MC2 740 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 NUDT12Q9BQG2 462 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 MTMR4Q9NYA4 1195 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 PODXL2Q9NZ53 605 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 ATP6V0A2Q9Y487 856 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 LTBP1Q14766 1721 aa17.02■□□□□ 0.32
BRCC3-201ENST00000330045 DOK7Q18PE1 504 aa17.02■□□□□ 0.32
BRCC3-201ENST00000330045 LRRC55Q6ZSA7 311 aa17.02■□□□□ 0.32
BRCC3-201ENST00000330045 GSPT2Q8IYD1 628 aaKnown RBP17.02■□□□□ 0.32
BRCC3-201ENST00000330045 TSG101Q99816 390 aa17.02■□□□□ 0.32
BRCC3-201ENST00000330045 CRACR2AQ9BSW2 395 aa17.02■□□□□ 0.32
BRCC3-201ENST00000330045 SELENOOQ9BVL4 669 aa17.02■□□□□ 0.32
BRCC3-201ENST00000330045 RIC8AQ9NPQ8 531 aa17.02■□□□□ 0.32
BRCC3-201ENST00000330045 FOCADQ5VW36 1801 aa17.02■□□□□ 0.32
BRCC3-201ENST00000330045 ZC3H4Q9UPT8 1303 aaKnown RBP17.02■□□□□ 0.31
BRCC3-201ENST00000330045 PRPF6O94906 941 aaKnown RBP17.02■□□□□ 0.31
BRCC3-201ENST00000330045 ITIH3Q06033 890 aa17.02■□□□□ 0.31
BRCC3-201ENST00000330045 EHHADHQ08426 723 aa17.02■□□□□ 0.31
BRCC3-201ENST00000330045 LRRC41Q15345 812 aa17.02■□□□□ 0.31
BRCC3-201ENST00000330045 ZNF572Q7Z3I7 529 aaPredicted RBP17.02■□□□□ 0.31
BRCC3-201ENST00000330045 KCNK18Q7Z418 384 aa17.02■□□□□ 0.31
BRCC3-201ENST00000330045 SP8Q8IXZ3 490 aa17.02■□□□□ 0.31
BRCC3-201ENST00000330045 BAP1Q92560 729 aa17.02■□□□□ 0.31
BRCC3-201ENST00000330045 ALS2CR12Q96Q35 445 aa17.02■□□□□ 0.31
BRCC3-201ENST00000330045 PLIN4Q96Q06 1357 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 A0A0U1RQG5 324 aaPredicted RBP17.01■□□□□ 0.31
BRCC3-201ENST00000330045 NPR1P16066 1061 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 ERCC3P19447 782 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 MAGEA1P43355 309 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 TMEM119Q4V9L6 283 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 CACNA2D4Q7Z3S7 1137 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 LRRC47Q8N1G4 583 aaKnown RBP17.01■□□□□ 0.31
BRCC3-201ENST00000330045 AFAP1L1Q8TED9 768 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 TCP1P17987 556 aaKnown RBP17.01■□□□□ 0.31
BRCC3-201ENST00000330045 TNNI2P48788 182 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 GTF2IP78347 998 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 FOXR2Q6PJQ5 311 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 GLIS3Q8NEA6 775 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 FLAD1Q8NFF5 587 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 OSBPL9Q96SU4 736 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 EDEM3Q9BZQ6 932 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 TANGO6Q9C0B7 1094 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 TSPYL1Q9H0U9 437 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 GPCPD1Q9NPB8 672 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 KCNQ5Q9NR82 932 aa17.01■□□□□ 0.31
BRCC3-201ENST00000330045 GAKO14976 1311 aa17■□□□□ 0.31
BRCC3-201ENST00000330045 LRRC37AA6NMS7 1700 aa17■□□□□ 0.31
BRCC3-201ENST00000330045 F8W031 263 aaPredicted RBP17■□□□□ 0.31
BRCC3-201ENST00000330045 GGCXP38435 758 aa17■□□□□ 0.31
BRCC3-201ENST00000330045 ATP2B2Q01814 1243 aa17■□□□□ 0.31
BRCC3-201ENST00000330045 PPP4R3AQ6IN85 833 aa17■□□□□ 0.31
BRCC3-201ENST00000330045 PDXDC1Q6P996 788 aa17■□□□□ 0.31
BRCC3-201ENST00000330045 GPIHBP1Q8IV16 184 aa17■□□□□ 0.31
BRCC3-201ENST00000330045 SPATA4Q8NEY3 305 aa17■□□□□ 0.31
BRCC3-201ENST00000330045 FAM184BQ9ULE4 1060 aa17■□□□□ 0.31
BRCC3-201ENST00000330045 HYOU1Q9Y4L1 999 aa17■□□□□ 0.31
BRCC3-201ENST00000330045 PJA2O43164 708 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 SNHG28P0DPA3 235 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 EIF6P56537 245 aaKnown RBP16.99■□□□□ 0.31
BRCC3-201ENST00000330045 NFRKBQ6P4R8 1299 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 MYOCDQ8IZQ8 938 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 RIN2Q8WYP3 895 aaPredicted RBP16.99■□□□□ 0.31
BRCC3-201ENST00000330045 LRRC1Q9BTT6 524 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 FKBP3Q00688 224 aaKnown RBP16.99■□□□□ 0.31
BRCC3-201ENST00000330045 KCNMA1Q12791 1236 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 ECM1Q16610 540 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 UBE2SQ16763 222 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 ASTE1Q2TB18 679 aaPredicted RBP16.99■□□□□ 0.31
BRCC3-201ENST00000330045 CCDC155Q8N6L0 562 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 AENQ8WTP8 325 aaKnown RBP16.99■□□□□ 0.31
BRCC3-201ENST00000330045 TBC1D22AQ8WUA7 517 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 RUBCNQ92622 972 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 HINFPQ9BQA5 517 aa16.99■□□□□ 0.31
BRCC3-201ENST00000330045 PNMA6FA0A0J9YX94 578 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 SSU72P8A0A1W2PR75 194 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 PDE6BP35913 854 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 GFPT1Q06210 699 aaPredicted RBP16.98■□□□□ 0.31
BRCC3-201ENST00000330045 COASYQ13057 564 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
BRCC3-201ENST00000330045 SEPT2Q15019 361 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 CCDC181Q5TID7 509 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 HDAC7Q8WUI4 952 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 DNAJC19Q96DA6 116 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 MASTLQ96GX5 879 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 JMJD4Q9H9V9 463 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 DDX25Q9UHL0 483 aaKnown RBP16.98■□□□□ 0.31
BRCC3-201ENST00000330045 FEZ2Q9UHY8 353 aaPredicted RBP16.98■□□□□ 0.31
BRCC3-201ENST00000330045 SALL4Q9UJQ4 1053 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 COL4A3BPQ9Y5P4 624 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 AGPSO00116 658 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 AKR1B1P15121 316 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 CXCR5P32302 372 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 PICALMQ13492 652 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 PPP1R18Q6NYC8 613 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 LRRC31Q6UY01 552 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 DPP8Q6V1X1 898 aaPredicted RBP16.98■□□□□ 0.31
BRCC3-201ENST00000330045 ARHGAP27Q6ZUM4 889 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 SRLQ86TD4 932 aa16.98■□□□□ 0.31
BRCC3-201ENST00000330045 ADGRF4Q8IZF3 695 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms