RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 PXMP2Q9NR77 195 aa18.71■□□□□ 0.59
PDLIM1-201ENST00000329399 CEP131Q9UPN4 1083 aa18.71■□□□□ 0.59
PDLIM1-201ENST00000329399 RBM47A0AV96 593 aaKnown RBP18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 MEIS2O14770 477 aa18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 ADAMTS3O15072 1205 aa18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 FOSBP53539 338 aa18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 PDE4DQ08499 809 aa18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 KCNA10Q16322 511 aa18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 L1TD1Q5T7N2 865 aaKnown RBP18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 FAM173BQ6P4H8 233 aa18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 NSUN6Q8TEA1 469 aaKnown RBP18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 USP28Q96RU2 1077 aa18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 UPF3AQ9H1J1 476 aaKnown RBP18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 VTA1Q9NP79 307 aa18.7■□□□□ 0.58
PDLIM1-201ENST00000329399 LRRC37A2A6NM11 1700 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 A0A1W2PQ27 194 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 A0A1W2PQ64 194 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 A0A1W2PQD8 194 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 GCOM1H8Y6P7 765 aaPredicted RBP18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 DYNC1LI2O43237 492 aaPredicted RBP18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 PPP6R2O75170 966 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 RGS20O76081 388 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 NR3C2P08235 984 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 POLR2MP0CAP2 368 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 GJA9P57773 515 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 CCDC183Q5T5S1 534 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 ARHGEF16Q5VV41 709 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 WWC2Q6AWC2 1192 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 IQSEC1Q6DN90 963 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 LINC00301Q8NCQ3 95 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 CHAMP1Q96JM3 812 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 HTATIP2Q9BUP3 242 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 WDR11Q9BZH6 1224 aa18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 SEC63Q9UGP8 760 aaKnown RBP18.69■□□□□ 0.58
PDLIM1-201ENST00000329399 GADD45BO75293 160 aaPredicted RBP18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 C6orf222P0C671 652 aaPredicted RBP18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 TRAPPC10P48553 1259 aa18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 SLC39A14Q15043 492 aa18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 STK38Q15208 465 aa18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 ADALQ6DHV7 355 aa18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 TEX2Q8IWB9 1127 aa18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 DAGLBQ8NCG7 672 aa18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 PDCD2LQ9BRP1 358 aa18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 MAF1Q9H063 256 aa18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 DDX19AQ9NUU7 478 aaKnown RBP18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 NOL7Q9UMY1 257 aaKnown RBP18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 PHF24Q9UPV7 400 aa18.68■□□□□ 0.58
PDLIM1-201ENST00000329399 SZT2Q5T011 3432 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 LOC102724159A0A0B4J2E5 919 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 KBTBD13C9JR72 458 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 EVI5O60447 810 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 PWP2Q15269 919 aaKnown RBP18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 SF3A1Q15459 793 aaKnown RBP18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 UBE2SQ16763 222 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 GNASQ5JWF2 1037 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 CCDC62Q6P9F0 684 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 SLC39A5Q6ZMH5 540 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 SEPT14Q6ZU15 432 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 HEATR3Q7Z4Q2 680 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 RNF180Q86T96 592 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 BARHL2Q9NY43 387 aa18.67■□□□□ 0.58
PDLIM1-201ENST00000329399 BTBD18B2RXH4 712 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 KIF28PB7ZC32 967 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 SPTLC2O15270 562 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 MYCLP12524 364 aaPredicted RBP18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 ACLYP53396 1101 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 NLRP5P59047 1200 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 NKX3-2P78367 333 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 TRAF1Q13077 416 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 PGM5Q15124 567 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 LY6KQ17RY6 165 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 ZSCAN23Q3MJ62 389 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 DUSP28Q4G0W2 176 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 TLK2Q86UE8 772 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 VSIG10LQ86VR7 867 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 C7orf61Q8IZ16 206 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 IWS1Q96ST2 819 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 GZF1Q9H116 711 aaPredicted RBP18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 GLT8D2Q9H1C3 349 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 BCAS3Q9H6U6 928 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 TRIOBPQ9H2D6 2365 aa18.66■□□□□ 0.58
PDLIM1-201ENST00000329399 A0A1W2PQ45 241 aaPredicted RBP18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 A0A1W2PQY0 241 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 ESYT2A0FGR8 921 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 GOLGA6L3A6NEY3 463 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 STXBP3O00186 592 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 ASGR1P07306 291 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 GNA11P29992 359 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 MRPS9P82933 396 aaKnown RBP18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 PRPF38BQ5VTL8 546 aaKnown RBP18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 PPP1R18Q6NYC8 613 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 BICD2Q8TD16 824 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 PSTPIP2Q9H939 334 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 GJB4Q9NTQ9 266 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 MAP3K20Q9NYL2 800 aaKnown RBP18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 VPS54Q9P1Q0 977 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 ZMYND8Q9ULU4 1186 aaPredicted RBP18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 KCNJ14Q9UNX9 436 aa18.65■□□□□ 0.58
PDLIM1-201ENST00000329399 SYN1P17600 705 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms