RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 DNERQ8NFT8 737 aa21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 ANO10Q9NW15 660 aa21.18■□□□□ 0.98
EXOSC3-201ENST00000327304 IGLV3-22A0A075B6J6 115 aa21.17■□□□□ 0.98
EXOSC3-201ENST00000327304 NR3C2P08235 984 aa21.17■□□□□ 0.98
EXOSC3-201ENST00000327304 GRIN1Q05586 938 aa21.17■□□□□ 0.98
EXOSC3-201ENST00000327304 ARL6IP4Q66PJ3 421 aaKnown RBP21.17■□□□□ 0.98
EXOSC3-201ENST00000327304 CSRNP2Q9H175 543 aa21.17■□□□□ 0.98
EXOSC3-201ENST00000327304 COBLO75128 1261 aa21.16■□□□□ 0.98
EXOSC3-201ENST00000327304 CCND2P30279 289 aa21.16■□□□□ 0.98
EXOSC3-201ENST00000327304 Q4G0T1 1027 aa21.16■□□□□ 0.98
EXOSC3-201ENST00000327304 CEP55Q53EZ4 464 aa21.16■□□□□ 0.98
EXOSC3-201ENST00000327304 VSIG10LQ86VR7 867 aa21.16■□□□□ 0.98
EXOSC3-201ENST00000327304 UIMC1Q96RL1 719 aa21.16■□□□□ 0.98
EXOSC3-201ENST00000327304 CFHR5Q9BXR6 569 aa21.16■□□□□ 0.98
EXOSC3-201ENST00000327304 ADD3Q9UEY8 706 aaKnown RBP21.16■□□□□ 0.98
EXOSC3-201ENST00000327304 OR52Z1P0C646 297 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 ITGB5P18084 799 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 CTGFP29279 349 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 IL17AQ16552 155 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 CALCRLQ16602 461 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 KRBA2Q6ZNG9 492 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 MTMR9Q96QG7 549 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 UBIAD1Q9Y5Z9 338 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 ZSWIM8A7E2V4 1837 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 ZNF236Q9UL36 1845 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 SLC15A5A6NIM6 579 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 ZNF165P49910 485 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 ZNF792Q3KQV3 632 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 GJA10Q969M2 543 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 IWS1Q96ST2 819 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 MXRA8Q9BRK3 442 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 CBX8Q9HC52 389 aa21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 HOOK1Q9UJC3 728 aaKnown RBP21.15■□□□□ 0.98
EXOSC3-201ENST00000327304 MEIS1O00470 390 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 LAD1O00515 517 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 EDNRBP24530 442 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 MORN1Q5T089 497 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 XRRA1Q6P2D8 792 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 PLA2G4DQ86XP0 818 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 DOCK3Q8IZD9 2030 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 CNNM3Q8NE01 707 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 HAS1Q92839 578 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 DNAJC25Q9H1X3 360 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 KCNMB3Q9NPA1 279 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 PLXNA1Q9UIW2 1896 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 LRRC37A2A6NM11 1700 aa21.14■□□□□ 0.97
EXOSC3-201ENST00000327304 PCNTO95613 3336 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 LONRF3Q496Y0 759 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 SPECC1Q5M775 1068 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 KANK3Q6NY19 840 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 ETNPPLQ8TBG4 499 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 TRIM44Q96DX7 344 aaPredicted RBP21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 WDR11Q9BZH6 1224 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 ARHGAP39Q9C0H5 1083 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 TUBE1Q9UJT0 475 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 VWA3AA6NCI4 1184 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 MSH4O15457 936 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 ARP10275 920 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 PRPHP41219 470 aa21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 LACTBP83111 547 aaPredicted RBP21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 ZRSR1Q15695 479 aaKnown RBP21.13■□□□□ 0.97
EXOSC3-201ENST00000327304 MGAMO43451 1857 aa21.12■□□□□ 0.97
EXOSC3-201ENST00000327304 TNPO2O14787 897 aaKnown RBP21.12■□□□□ 0.97
EXOSC3-201ENST00000327304 TXKP42681 527 aa21.12■□□□□ 0.97
EXOSC3-201ENST00000327304 NIPA1Q7RTP0 329 aa21.12■□□□□ 0.97
EXOSC3-201ENST00000327304 DPP9Q86TI2 863 aa21.12■□□□□ 0.97
EXOSC3-201ENST00000327304 NAT10Q9H0A0 1025 aaKnown RBP21.12■□□□□ 0.97
EXOSC3-201ENST00000327304 JADE2Q9NQC1 790 aa21.12■□□□□ 0.97
EXOSC3-201ENST00000327304 POLR2DO15514 142 aaKnown RBP21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 RGS20O76081 388 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 SETQ01105 290 aaPredicted RBP21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 PDE4DQ08499 809 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 STXBP2Q15833 593 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 DTHD1Q6ZMT9 781 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 CCDC34Q96HJ3 373 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 TRIM47Q96LD4 638 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 INPP4AQ96PE3 977 aaPredicted RBP21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 PYM1Q9BRP8 204 aaKnown RBP21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 USP25Q9UHP3 1055 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 MARCH6O60337 910 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 LONP1P36776 959 aaKnown RBP21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 PSMC4P43686 418 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 NLRP12P59046 1061 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 CAP1Q01518 475 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 SP3Q02447 781 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 MAP2K5Q13163 448 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 LUZP1Q86V48 1076 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 CEP57L1Q8IYX8 460 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 NPLOC4Q8TAT6 608 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 USP6NLQ92738 828 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 KCNH7Q9NS40 1196 aa21.11■□□□□ 0.97
EXOSC3-201ENST00000327304 MCM3APO60318 1980 aa21.1■□□□□ 0.97
EXOSC3-201ENST00000327304 TBX3O15119 743 aa21.1■□□□□ 0.97
EXOSC3-201ENST00000327304 FCGRTP55899 365 aa21.1■□□□□ 0.97
EXOSC3-201ENST00000327304 MDM2Q00987 491 aaPredicted RBP21.1■□□□□ 0.97
EXOSC3-201ENST00000327304 MTMR1Q13613 665 aa21.1■□□□□ 0.97
EXOSC3-201ENST00000327304 IQCB1Q15051 598 aa21.1■□□□□ 0.97
EXOSC3-201ENST00000327304 HS1BP3Q53T59 392 aa21.1■□□□□ 0.97
EXOSC3-201ENST00000327304 C11orf57Q6ZUT1 292 aaPredicted RBP21.1■□□□□ 0.97
EXOSC3-201ENST00000327304 SYMPKQ92797 1274 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms