RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 STXBP2Q15833 593 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 ZNF792Q3KQV3 632 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 SPECC1Q5M775 1068 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 NLRX1Q86UT6 975 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 FMR1NBQ8N0W7 255 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 MORC4Q8TE76 937 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 TTC12Q9H892 705 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 DDX19AQ9NUU7 478 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 KIAA1217Q5T5P2 1943 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 TECP42680 631 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 PDE4DQ08499 809 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 PDIA5Q14554 519 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 USP49Q70CQ1 688 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 ZNF577Q9BSK1 485 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 WDR11Q9BZH6 1224 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 KCNH7Q9NS40 1196 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 DACT1Q9NYF0 836 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 PCDHA12Q9UN75 941 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 COBLO75128 1261 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 NR1I2O75469 434 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 EIF3JO75822 258 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 TXLNAP40222 546 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 SNW1Q13573 536 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 MORN1Q5T089 497 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 ZNF467Q7Z7K2 595 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 GJA10Q969M2 543 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 SYAP1Q96A49 352 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 EPSTI1Q96J88 318 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 RIT2Q99578 217 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 AGO4Q9HCK5 861 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 VAV3Q9UKW4 847 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 KCNH3Q9ULD8 1083 aa11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 DIS3Q9Y2L1 958 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-201ENST00000327028 ASB14A6NK59 587 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 MAFGO15525 162 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 PSMD10O75832 226 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 RGS20O76081 388 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 SYKP43405 635 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 SPIRE1Q08AE8 756 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 GNPTABQ3T906 1256 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 CAVIN1Q6NZI2 390 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 CDHR1Q96JP9 859 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 CCSER1Q9C0I3 900 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 LRWD1Q9UFC0 647 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 POTEMA6NI47 508 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 PP2D1A8MPX8 630 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 IPO5O00410 1097 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 LRCH2Q5VUJ6 765 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 TEKT3Q9BXF9 490 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 SLC5A4Q9NY91 659 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 MCM3APO60318 1980 aa11.55□□□□□ -0.56
VIPAS39-201ENST00000327028 SLC26A4O43511 780 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 GAS7O60861 476 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 KINO60870 393 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 ICAM3P32942 547 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 UBA7P41226 1012 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 MAP2K5Q13163 448 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 SEMA3FQ13275 785 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 PPP2R5CQ13362 524 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 CCDC183Q5T5S1 534 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 SOCS4Q8WXH5 440 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 UIMC1Q96RL1 719 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 PYM1Q9BRP8 204 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 CLSTN2Q9H4D0 955 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 RNF186Q9NXI6 227 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 TMEM63CQ9P1W3 806 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 ZSWIM8A7E2V4 1837 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 SPATA31C2B4DYI2 1134 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 ZNF202O95125 648 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 ITGB3BPQ13352 177 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 DPP9Q86TI2 863 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 CABP7Q86V35 215 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 TBC1D22BQ9NU19 505 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
VIPAS39-201ENST00000327028 DOCK3Q8IZD9 2030 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 A0A087X0B3 334 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 TNPO2O14787 897 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 TBC1D8O95759 1140 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 HOXC6P09630 235 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 HSPA6P17066 643 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 CDC25AP30304 524 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 FCGRTP55899 365 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 LACTBP83111 547 aaPredicted RBP11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 B3GNT9Q6UX72 402 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 MAMDC4Q6UXC1 1216 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 ARMCX2Q7L311 632 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 USP6NLQ92738 828 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 MAML3Q96JK9 1138 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 TIGD1Q96MW7 591 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 MMTAG2Q9BU76 263 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 NUP62CLQ9H1M0 184 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 CCDC39Q9UFE4 941 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 USP25Q9UHP3 1055 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 POLR2DO15514 142 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 DHX15O43143 795 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 KCNA2P16389 499 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 KRT79Q5XKE5 535 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 NCAPH2Q6IBW4 605 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 OTOP1Q7RTM1 612 aa11.53□□□□□ -0.56
VIPAS39-201ENST00000327028 MSL3Q8N5Y2 521 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms