RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 CASC1Q6TDU7 716 aa20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 TMEM87BQ96K49 555 aa20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 HDAC6Q9UBN7 1215 aa20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 FRMPD4Q14CM0 1322 aa20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 TTC28Q96AY4 2481 aa20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 KIF28PB7ZC32 967 aa20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 GGPS1O95749 300 aa20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 PTK7Q13308 1070 aa20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 MFSD10Q14728 455 aa20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 KIAA0753Q2KHM9 967 aa20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 GNPTABQ3T906 1256 aa20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 FCHSD1Q86WN1 690 aa20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 PPP1R13LQ8WUF5 828 aa20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 RRP36Q96EU6 259 aaKnown RBP20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 SPATA33Q96N06 139 aa20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 LY9Q9HBG7 655 aa20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 SPTBN5Q9NRC6 3674 aaKnown RBP20.46■□□□□ 0.87
PTPMT1-201ENST00000326656 PIK3CDO00329 1044 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 CALM1P0DP23 149 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 CALM2P0DP24 149 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 CALM3P0DP25 149 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 ICAM3P32942 547 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 LIFRP42702 1097 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 SP2Q02086 613 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 ADGRE1Q14246 886 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 HSDL1Q3SXM5 330 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 LRRC8DQ7L1W4 858 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 ZNF654Q8IZM8 581 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 IL31RAQ8NI17 732 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 ATXN2LQ8WWM7 1075 aaKnown RBP20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 INPP4AQ96PE3 977 aaPredicted RBP20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 MLXIPQ9HAP2 919 aa20.45■□□□□ 0.86
PTPMT1-201ENST00000326656 TET1Q8NFU7 2136 aa20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 PRC1O43663 620 aa20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 EFCAB14O75071 495 aa20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 CXCL10P02778 98 aa20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 CKBP12277 381 aa20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 UBA1P22314 1058 aaKnown RBP20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 NEDD9Q14511 834 aa20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 HERC6Q8IVU3 1022 aa20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 USP38Q8NB14 1042 aa20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 DHX38Q92620 1227 aaKnown RBP20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 ALG1Q9BT22 464 aa20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 LSG1Q9H089 658 aaKnown RBP20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 SEC63Q9UGP8 760 aaKnown RBP20.44■□□□□ 0.86
PTPMT1-201ENST00000326656 SPATA31C2B4DYI2 1134 aa20.43■□□□□ 0.86
PTPMT1-201ENST00000326656 POU3F3P20264 500 aaPredicted RBP20.43■□□□□ 0.86
PTPMT1-201ENST00000326656 KCNJ6P48051 423 aa20.43■□□□□ 0.86
PTPMT1-201ENST00000326656 GPNMBQ14956 572 aa20.43■□□□□ 0.86
PTPMT1-201ENST00000326656 TJAP1Q5JTD0 557 aa20.43■□□□□ 0.86
PTPMT1-201ENST00000326656 CUL5Q93034 780 aa20.43■□□□□ 0.86
PTPMT1-201ENST00000326656 C16orf70Q9BSU1 422 aa20.43■□□□□ 0.86
PTPMT1-201ENST00000326656 USP26Q9BXU7 913 aa20.43■□□□□ 0.86
PTPMT1-201ENST00000326656 ABHD14A-ACY1A0A1B0GW23 586 aa20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 CCDC69A6NI79 296 aa20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 H3BRB1 525 aa20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 ZNF286BP0CG31 522 aa20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 MYOGP15173 224 aa20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 IGFBP4P22692 258 aa20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 MRPS9P82933 396 aaKnown RBP20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 NECTIN1Q15223 517 aa20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 CNKSR3Q6P9H4 555 aa20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 SMARCC2Q8TAQ2 1214 aa20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 SENP7Q9BQF6 1050 aa20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 ESYT1Q9BSJ8 1104 aa20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 TUT1Q9H6E5 874 aaKnown RBP20.42■□□□□ 0.86
PTPMT1-201ENST00000326656 SH2B2O14492 632 aaPredicted RBP20.41■□□□□ 0.86
PTPMT1-201ENST00000326656 FIBPO43427 364 aa20.41■□□□□ 0.86
PTPMT1-201ENST00000326656 CA3P07451 260 aa20.41■□□□□ 0.86
PTPMT1-201ENST00000326656 TRIM71Q2Q1W2 868 aaKnown RBP20.41■□□□□ 0.86
PTPMT1-201ENST00000326656 PCNX4Q63HM2 1172 aa20.41■□□□□ 0.86
PTPMT1-201ENST00000326656 METTL7BQ6UX53 244 aa20.41■□□□□ 0.86
PTPMT1-201ENST00000326656 NFXL1Q6ZNB6 911 aa20.41■□□□□ 0.86
PTPMT1-201ENST00000326656 SERINC5Q86VE9 423 aa20.41■□□□□ 0.86
PTPMT1-201ENST00000326656 TEX2Q8IWB9 1127 aa20.41■□□□□ 0.86
PTPMT1-201ENST00000326656 TSPYL2Q9H2G4 693 aaPredicted RBP20.41■□□□□ 0.86
PTPMT1-201ENST00000326656 EMSYQ7Z589 1322 aa20.41■□□□□ 0.86
PTPMT1-201ENST00000326656 NOP56O00567 594 aaKnown RBP20.4■□□□□ 0.86
PTPMT1-201ENST00000326656 SLC27A2O14975 620 aa20.4■□□□□ 0.86
PTPMT1-201ENST00000326656 IKBKEQ14164 716 aa20.4■□□□□ 0.86
PTPMT1-201ENST00000326656 GIMAP8Q8ND71 665 aaPredicted RBP20.4■□□□□ 0.86
PTPMT1-201ENST00000326656 THEGQ9P2T0 379 aa20.4■□□□□ 0.86
PTPMT1-201ENST00000326656 MEIS2O14770 477 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 NBNO60934 754 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 CAND2O75155 1236 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 GNAT1P11488 350 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 HOXC8P31273 242 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 WDR5P61964 334 aaKnown RBP20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 BMP2KLQ5H9B9 411 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 RNF20Q5VTR2 975 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 CREB3L3Q68CJ9 461 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 TRAF7Q6Q0C0 670 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 NLRX1Q86UT6 975 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 SRBD1Q8N5C6 995 aaKnown RBP20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 PPM1EQ8WY54 764 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 GPKOWQ92917 476 aaPredicted RBP eCLIP20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 SLC12A7Q9Y666 1083 aa20.39■□□□□ 0.85
PTPMT1-201ENST00000326656 C17orf102A2RUQ5 167 aa20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 TLL1O43897 1013 aa20.38■□□□□ 0.85
PTPMT1-201ENST00000326656 LGALS2P05162 132 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms