RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 TBX3O15119 743 aa23.8■■□□□ 1.4
LIMS2-201ENST00000324938 ZRANB2O95218 330 aaKnown RBP eCLIP23.8■■□□□ 1.4
LIMS2-201ENST00000324938 BMP3P12645 472 aa23.8■■□□□ 1.4
LIMS2-201ENST00000324938 CHMP4BP1P59074 171 aa23.8■■□□□ 1.4
LIMS2-201ENST00000324938 BMS1Q14692 1282 aaKnown RBP23.8■■□□□ 1.4
LIMS2-201ENST00000324938 FAM26FQ5R3K3 315 aa23.8■■□□□ 1.4
LIMS2-201ENST00000324938 ETNPPLQ8TBG4 499 aa23.8■■□□□ 1.4
LIMS2-201ENST00000324938 ATAD5Q96QE3 1844 aa23.79■■□□□ 1.4
LIMS2-201ENST00000324938 POTEB3A0JP26 581 aa23.79■■□□□ 1.4
LIMS2-201ENST00000324938 POTECB2RU33 542 aa23.79■■□□□ 1.4
LIMS2-201ENST00000324938 E9PMD0 336 aa23.79■■□□□ 1.4
LIMS2-201ENST00000324938 FOSP01100 380 aaPredicted RBP23.79■■□□□ 1.4
LIMS2-201ENST00000324938 PLA2G4BP0C869 781 aa23.79■■□□□ 1.4
LIMS2-201ENST00000324938 LRRC41Q15345 812 aa23.79■■□□□ 1.4
LIMS2-201ENST00000324938 Q4G0T1 1027 aa23.79■■□□□ 1.4
LIMS2-201ENST00000324938 POTEBQ6S5H4 581 aa23.79■■□□□ 1.4
LIMS2-201ENST00000324938 TMCO3Q6UWJ1 677 aa23.79■■□□□ 1.4
LIMS2-201ENST00000324938 CSRNP1Q96S65 589 aa23.79■■□□□ 1.4
LIMS2-201ENST00000324938 KIF13BQ9NQT8 1826 aa23.79■■□□□ 1.4
LIMS2-201ENST00000324938 PPIP5K2O43314 1243 aa23.78■■□□□ 1.4
LIMS2-201ENST00000324938 SREBF1P36956 1147 aa23.78■■□□□ 1.4
LIMS2-201ENST00000324938 SNAP25P60880 206 aa23.78■■□□□ 1.4
LIMS2-201ENST00000324938 SPIRE1Q08AE8 756 aa23.78■■□□□ 1.4
LIMS2-201ENST00000324938 RRP1BQ14684 758 aaKnown RBP23.78■■□□□ 1.4
LIMS2-201ENST00000324938 NHEJ1Q9H9Q4 299 aaPredicted RBP23.78■■□□□ 1.4
LIMS2-201ENST00000324938 SMCHD1A6NHR9 2005 aa23.78■■□□□ 1.4
LIMS2-201ENST00000324938 EIF3CLB5ME19 914 aaKnown RBP23.78■■□□□ 1.4
LIMS2-201ENST00000324938 SSBP05455 408 aaKnown RBP eCLIP23.78■■□□□ 1.4
LIMS2-201ENST00000324938 HNRNPH3P31942 346 aaKnown RBP23.78■■□□□ 1.4
LIMS2-201ENST00000324938 IKQ13123 557 aaPredicted RBP23.78■■□□□ 1.4
LIMS2-201ENST00000324938 HAUS3Q68CZ6 603 aa23.78■■□□□ 1.4
LIMS2-201ENST00000324938 CCDC65Q8IXS2 484 aa23.78■■□□□ 1.4
LIMS2-201ENST00000324938 EIF3CQ99613 913 aaKnown RBP23.78■■□□□ 1.4
LIMS2-201ENST00000324938 EPC1Q9H2F5 836 aa23.78■■□□□ 1.4
LIMS2-201ENST00000324938 TRIM10Q9UDY6 481 aa23.78■■□□□ 1.4
LIMS2-201ENST00000324938 HERC5Q9UII4 1024 aaKnown RBP23.78■■□□□ 1.4
LIMS2-201ENST00000324938 FHOD1Q9Y613 1164 aa23.78■■□□□ 1.4
LIMS2-201ENST00000324938 WHAMMP3Q1A5X7 153 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 USH1GQ495M9 461 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 CCDC84Q86UT8 332 aaPredicted RBP23.77■■□□□ 1.4
LIMS2-201ENST00000324938 GUCA1BQ9UMX6 200 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 PCDHA2Q9Y5H9 948 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 SPDYE3A6NKU9 549 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 PSMD14O00487 310 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 MED24O75448 989 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 ZSCAN20P17040 1043 aaPredicted RBP23.77■■□□□ 1.4
LIMS2-201ENST00000324938 CYP11B2P19099 503 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 AMPD2Q01433 879 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 GPBP1Q86WP2 473 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 LENG9Q96B70 501 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 UIMC1Q96RL1 719 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 PRDM10Q9NQV6 1147 aa23.77■■□□□ 1.4
LIMS2-201ENST00000324938 A0A1W2PRG0 241 aa23.76■■□□□ 1.39
LIMS2-201ENST00000324938 STAT3P40763 770 aa23.76■■□□□ 1.39
LIMS2-201ENST00000324938 SLC15A2Q16348 729 aa23.76■■□□□ 1.39
LIMS2-201ENST00000324938 PRR16Q569H4 304 aa23.76■■□□□ 1.39
LIMS2-201ENST00000324938 PITPNM2Q9BZ72 1349 aa23.76■■□□□ 1.39
LIMS2-201ENST00000324938 FRMD3A2A2Y4 597 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 OPLAHO14841 1288 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 PNMA6AP0CW24 399 aaPredicted RBP23.75■■□□□ 1.39
LIMS2-201ENST00000324938 TUBB4BP68371 445 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 FKBP3Q00688 224 aaKnown RBP23.75■■□□□ 1.39
LIMS2-201ENST00000324938 CCDC122Q5T0U0 273 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 TMOD2Q9NZR1 351 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 PLAGL2Q9UPG8 496 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 IPO7O95373 1038 aaKnown RBP23.75■■□□□ 1.39
LIMS2-201ENST00000324938 CIITAP33076 1130 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 SLC12A3P55017 1021 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 KIAA1328Q86T90 577 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 EHBP1Q8NDI1 1231 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 ERMNQ8TAM6 284 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 JAKMIP2Q96AA8 810 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 PARD6BQ9BYG5 372 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 PUF60Q9UHX1 559 aaKnown RBP23.75■■□□□ 1.39
LIMS2-201ENST00000324938 COL4A3BPQ9Y5P4 624 aa23.75■■□□□ 1.39
LIMS2-201ENST00000324938 SPDYE2BA6NHP3 402 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 KRT86O43790 486 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 SPDYE6P0CI01 402 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 FAM20AQ96MK3 541 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 CEP63Q96MT8 703 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 FGFBP2Q9BYJ0 223 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.74■■□□□ 1.39
LIMS2-201ENST00000324938 PRR12Q9ULL5 1215 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 STK24Q9Y6E0 443 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 POTEFA5A3E0 1075 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 FAM86B1E9PN63 330 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 EPHB6O15197 1021 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 ATP8B1O43520 1251 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 FAM86B2P0C5J1 330 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 POTEIP0CG38 1075 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 CC2D1AQ6P1N0 951 aaPredicted RBP23.74■■□□□ 1.39
LIMS2-201ENST00000324938 POTEGQ6S5H5 508 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 POTEEQ6S8J3 1075 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 ZSWIM4Q9H7M6 989 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 MYO6Q9UM54 1294 aa23.74■■□□□ 1.39
LIMS2-201ENST00000324938 PIK3CDO00329 1044 aa23.73■■□□□ 1.39
LIMS2-201ENST00000324938 C21orf2O43822 256 aa23.73■■□□□ 1.39
LIMS2-201ENST00000324938 CATSPER3Q86XQ3 398 aa23.73■■□□□ 1.39
LIMS2-201ENST00000324938 TEX2Q8IWB9 1127 aa23.73■■□□□ 1.39
LIMS2-201ENST00000324938 ARHGEF10LQ9HCE6 1279 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms