RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SLC30A10Q6XR72 485 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 KIRREL3Q8IZU9 778 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 LEMD3Q9Y2U8 911 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 HYOU1Q9Y4L1 999 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 POTEB3A0JP26 581 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 POTECB2RU33 542 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 XRCC5P13010 732 aaKnown RBP16.73■□□□□ 0.27
VARS2-201ENST00000321897 ALAS1P13196 640 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 POTEBQ6S5H4 581 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 EP400NLQ6ZTU2 488 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 DGKHQ86XP1 1220 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 CCDC50Q8IVM0 306 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 CSRNP1Q96S65 589 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 MAP3K14Q99558 947 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 PHF20Q9BVI0 1012 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 REREQ9P2R6 1566 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 CCNE1P24864 410 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 TRAPPC10P48553 1259 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 PLCB3Q01970 1234 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 GUCY1A3Q02108 690 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 TRIM58Q8NG06 486 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 PANX2Q96RD6 677 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 LZTS2Q9BRK4 669 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 NDST4Q9H3R1 872 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 FRMD4BQ9Y2L6 1034 aa16.73■□□□□ 0.27
VARS2-201ENST00000321897 STK36Q9NRP7 1315 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 A0A087X0B3 334 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 NPHP3-ACAD11A0A0J9YXS1 232 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 GAS7O60861 476 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 TAL1P17542 331 aaPredicted RBP16.72■□□□□ 0.27
VARS2-201ENST00000321897 TNFAIP3P21580 790 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 BEND6Q5SZJ8 279 aaPredicted RBP16.72■□□□□ 0.27
VARS2-201ENST00000321897 CLEC4GQ6UXB4 293 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 PEX26Q7Z412 305 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 RPGRIP1Q96KN7 1286 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 TSGA10Q9BZW7 698 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 CPSF2Q9P2I0 782 aaKnown RBP16.72■□□□□ 0.27
VARS2-201ENST00000321897 CTNNA2P26232 953 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 RPL13P26373 211 aaKnown RBP16.72■□□□□ 0.27
VARS2-201ENST00000321897 ATP2C1P98194 919 aaPredicted RBP16.72■□□□□ 0.27
VARS2-201ENST00000321897 BIRC3Q13489 604 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 STXBP4Q6ZWJ1 553 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 AGXT2Q9BYV1 514 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 EHD4Q9H223 541 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 TDRD3Q9H7E2 651 aaKnown RBP16.72■□□□□ 0.27
VARS2-201ENST00000321897 CTTNBP2NLQ9P2B4 639 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 LRRIQ3A6PVS8 624 aaPredicted RBP16.72■□□□□ 0.27
VARS2-201ENST00000321897 H0YIN7 160 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 PPEF1O14829 653 aaPredicted RBP16.72■□□□□ 0.27
VARS2-201ENST00000321897 RPS6KA1Q15418 735 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 RBM43Q6ZSC3 357 aaKnown RBP16.72■□□□□ 0.27
VARS2-201ENST00000321897 FBXO11Q86XK2 927 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 TAB3Q8N5C8 712 aaPredicted RBP16.72■□□□□ 0.27
VARS2-201ENST00000321897 BHMT2Q9H2M3 363 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 CD2APQ9Y5K6 639 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 PNPLA7Q6ZV29 1317 aa16.72■□□□□ 0.27
VARS2-201ENST00000321897 WNT7AO00755 349 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 TTLL1O95922 423 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 CTTNQ14247 550 aaKnown RBP16.71■□□□□ 0.27
VARS2-201ENST00000321897 C12orf60Q5U649 245 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 ANKRD40Q6AI12 368 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 TRIM65Q6PJ69 517 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 SLC51AQ86UW1 340 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 SEPT12Q8IYM1 358 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 A0A1W2PRG0 241 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 SPOPO43791 374 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 SEPT2Q15019 361 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 LRP10Q7Z4F1 713 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 COG1Q8WTW3 980 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.71■□□□□ 0.27
VARS2-201ENST00000321897 KNDC1Q76NI1 1749 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 IFT172Q9UG01 1749 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 TESPA1A2RU30 521 aaPredicted RBP16.71■□□□□ 0.27
VARS2-201ENST00000321897 POTEFA5A3E0 1075 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 MMP10P09238 476 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 POTEIP0CG38 1075 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 NR1D1P20393 614 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 CORO7P57737 925 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 GFPT1Q06210 699 aaPredicted RBP16.71■□□□□ 0.27
VARS2-201ENST00000321897 POTEGQ6S5H5 508 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 POTEEQ6S8J3 1075 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 DNAAF5Q86Y56 855 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 NSRP1Q9H0G5 558 aaKnown RBP16.71■□□□□ 0.27
VARS2-201ENST00000321897 QTRT2Q9H974 415 aaKnown RBP16.71■□□□□ 0.27
VARS2-201ENST00000321897 GINS2Q9Y248 185 aa16.71■□□□□ 0.27
VARS2-201ENST00000321897 ZRANB2O95218 330 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■■■■■ 34.2
VARS2-201ENST00000321897 ADCY1Q08828 1119 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 ANKRD42Q8N9B4 389 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 FAM184BQ9ULE4 1060 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 GYPCP04921 128 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 BMP6P22004 513 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 MKRN4PQ13434 485 aaPredicted RBP16.7■□□□□ 0.26
VARS2-201ENST00000321897 FAM133BQ5BKY9 247 aaKnown RBP16.7■□□□□ 0.26
VARS2-201ENST00000321897 GKAP1Q5VSY0 366 aaPredicted RBP16.7■□□□□ 0.26
VARS2-201ENST00000321897 BPIFA3Q9BQP9 254 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 HDAC9Q9UKV0 1011 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 SUFUQ9UMX1 484 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 DUSP10Q9Y6W6 482 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 KIF11P52732 1056 aa16.7■□□□□ 0.26
VARS2-201ENST00000321897 ABCB5Q2M3G0 1257 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms