RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 SP4Q02446 784 aa18.45■□□□□ 0.54
HDDC2-201ENST00000318787 LAMC2Q13753 1193 aa18.45■□□□□ 0.54
HDDC2-201ENST00000318787 TMEM199Q8N511 208 aa18.45■□□□□ 0.54
HDDC2-201ENST00000318787 PGBD1Q96JS3 809 aa18.45■□□□□ 0.54
HDDC2-201ENST00000318787 FAM217BQ9NTX9 383 aaPredicted RBP18.45■□□□□ 0.54
HDDC2-201ENST00000318787 UMODL1Q5DID0 1318 aa18.45■□□□□ 0.54
HDDC2-201ENST00000318787 CYP2C9P11712 490 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 CSF2RAP15509 400 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 ADCY7P51828 1080 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 EPHB4P54760 987 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 AKAP17AQ02040 695 aaKnown RBP18.44■□□□□ 0.54
HDDC2-201ENST00000318787 SP2Q02086 613 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 SCN5AQ14524 2016 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 FRMPD4Q14CM0 1322 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 LRIT3Q3SXY7 679 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 CELF3Q5SZQ8 465 aaKnown RBP18.44■□□□□ 0.54
HDDC2-201ENST00000318787 PCNX4Q63HM2 1172 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 MFSD5Q6N075 450 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 RNPC3Q96LT9 517 aaKnown RBP18.44■□□□□ 0.54
HDDC2-201ENST00000318787 SEZ6LQ9BYH1 1024 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 PKD2L1Q9P0L9 805 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 PCDHA6Q9UN73 950 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 PCDHA8Q9Y5H6 950 aa18.44■□□□□ 0.54
HDDC2-201ENST00000318787 TRIP12Q14669 1992 aaPredicted RBP18.44■□□□□ 0.54
HDDC2-201ENST00000318787 NOP56O00567 594 aaKnown RBP18.43■□□□□ 0.54
HDDC2-201ENST00000318787 EPB41L2O43491 1005 aaKnown RBP18.43■□□□□ 0.54
HDDC2-201ENST00000318787 STAM2O75886 525 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 ACRP10323 421 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 RCAN1P53805 252 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 FUT2Q10981 343 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 STK3Q13188 491 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 HSDL1Q3SXM5 330 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 MYSM1Q5VVJ2 828 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 TYW1BQ6NUM6 668 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 NLRX1Q86UT6 975 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 PPTC7Q8NI37 304 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 PHKBQ93100 1093 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 EHMT1Q9H9B1 1298 aa18.43■□□□□ 0.54
HDDC2-201ENST00000318787 NCOA5Q9HCD5 579 aaKnown RBP18.43■□□□□ 0.54
HDDC2-201ENST00000318787 SMCO2A6NFE2 343 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 STXBP3O00186 592 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 FIBPO43427 364 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 SUPT20HL2P0C7V6 817 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 PPIGQ13427 754 aaKnown RBP eCLIP18.42■□□□□ 0.54
HDDC2-201ENST00000318787 CYFIP1Q7L576 1253 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 BCAS3Q9H6U6 928 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 ZSWIM6Q9HCJ5 1215 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 TANC1Q9C0D5 1861 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 TGFB3P10600 412 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 SCG2P13521 617 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 PSEN2P49810 448 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 TOB2Q14106 344 aaPredicted RBP18.42■□□□□ 0.54
HDDC2-201ENST00000318787 MFSD10Q14728 455 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 PPP1R18Q6NYC8 613 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 NFRKBQ6P4R8 1299 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 C7orf31Q8N865 590 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 EMID1Q96A84 441 aaPredicted RBP18.42■□□□□ 0.54
HDDC2-201ENST00000318787 SCLYQ96I15 445 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 INPP4AQ96PE3 977 aaPredicted RBP18.42■□□□□ 0.54
HDDC2-201ENST00000318787 NOC4LQ9BVI4 516 aaKnown RBP18.42■□□□□ 0.54
HDDC2-201ENST00000318787 KATNAL1Q9BW62 490 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 SLC26A6Q9BXS9 759 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 RIC8AQ9NPQ8 531 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 PDRG1Q9NUG6 133 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 TMEM260Q9NX78 707 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 BARHL2Q9NY43 387 aa18.42■□□□□ 0.54
HDDC2-201ENST00000318787 hCG_1984214I3L0E3 225 aa18.41■□□□□ 0.54
HDDC2-201ENST00000318787 PDIA3P30101 505 aaKnown RBP18.41■□□□□ 0.54
HDDC2-201ENST00000318787 NEDD9Q14511 834 aa18.41■□□□□ 0.54
HDDC2-201ENST00000318787 PTGISQ16647 500 aa18.41■□□□□ 0.54
HDDC2-201ENST00000318787 PFKFB3Q16875 520 aaPredicted RBP18.41■□□□□ 0.54
HDDC2-201ENST00000318787 KIAA0753Q2KHM9 967 aa18.41■□□□□ 0.54
HDDC2-201ENST00000318787 Q7L0L9 218 aa18.41■□□□□ 0.54
HDDC2-201ENST00000318787 ZNF713Q8N859 430 aaPredicted RBP18.41■□□□□ 0.54
HDDC2-201ENST00000318787 KAT2BQ92831 832 aa18.41■□□□□ 0.54
HDDC2-201ENST00000318787 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.41■□□□□ 0.548e-10■■□□□ 11.4
HDDC2-201ENST00000318787 AGXT2Q9BYV1 514 aa18.41■□□□□ 0.54
HDDC2-201ENST00000318787 LAMA2P24043 3122 aaKnown RBP18.4■□□□□ 0.54
HDDC2-201ENST00000318787 SPATA31C2B4DYI2 1134 aa18.4■□□□□ 0.54
HDDC2-201ENST00000318787 CPLX1O14810 134 aa18.4■□□□□ 0.54
HDDC2-201ENST00000318787 SEMA3FQ13275 785 aa18.4■□□□□ 0.54
HDDC2-201ENST00000318787 MTMR1Q13613 665 aa18.4■□□□□ 0.54
HDDC2-201ENST00000318787 JAKMIP3Q5VZ66 844 aa18.4■□□□□ 0.54
HDDC2-201ENST00000318787 XRRA1Q6P2D8 792 aa18.4■□□□□ 0.54
HDDC2-201ENST00000318787 FAM161BQ96MY7 647 aa18.4■□□□□ 0.54
HDDC2-201ENST00000318787 ANO3Q9BYT9 981 aa18.4■□□□□ 0.54
HDDC2-201ENST00000318787 HDAC6Q9UBN7 1215 aa18.4■□□□□ 0.54
HDDC2-201ENST00000318787 KAT6AQ92794 2004 aa18.39■□□□□ 0.53
HDDC2-201ENST00000318787 ICAM3P32942 547 aa18.39■□□□□ 0.53
HDDC2-201ENST00000318787 UTP14CQ5TAP6 766 aaKnown RBP18.39■□□□□ 0.53
HDDC2-201ENST00000318787 GDF6Q6KF10 455 aaPredicted RBP18.39■□□□□ 0.53
HDDC2-201ENST00000318787 DEFB128Q7Z7B8 93 aa18.39■□□□□ 0.53
HDDC2-201ENST00000318787 DEFB123Q8N688 67 aa18.39■□□□□ 0.53
HDDC2-201ENST00000318787 TM6SF1Q9BZW5 370 aa18.39■□□□□ 0.53
HDDC2-201ENST00000318787 WNT8AQ9H1J5 351 aa18.39■□□□□ 0.53
HDDC2-201ENST00000318787 GBF1Q92538 1859 aa18.39■□□□□ 0.53
HDDC2-201ENST00000318787 NID2Q14112 1375 aa18.38■□□□□ 0.53
HDDC2-201ENST00000318787 PRPF3O43395 683 aaKnown RBP18.38■□□□□ 0.53
HDDC2-201ENST00000318787 PPFIA4O75335 1185 aa18.38■□□□□ 0.53
HDDC2-201ENST00000318787 F2P00734 622 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms