RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 SEPT4O43236 478 aa9□□□□□ -0.97
CDC42-201ENST00000315554 ARIH2O95376 493 aa9□□□□□ -0.97
CDC42-201ENST00000315554 SGPL1O95470 568 aa9□□□□□ -0.97
CDC42-201ENST00000315554 PGK1P00558 417 aa9□□□□□ -0.97
CDC42-201ENST00000315554 GJB1P08034 283 aa9□□□□□ -0.97
CDC42-201ENST00000315554 AKR1A1P14550 325 aa9□□□□□ -0.97
CDC42-201ENST00000315554 SMPD1P17405 629 aa9□□□□□ -0.97
CDC42-201ENST00000315554 CCND2P30279 289 aa9□□□□□ -0.97
CDC42-201ENST00000315554 PSEN2P49810 448 aa9□□□□□ -0.97
CDC42-201ENST00000315554 STXBP2Q15833 593 aa9□□□□□ -0.97
CDC42-201ENST00000315554 TAPT1Q6NXT6 567 aa9□□□□□ -0.97
CDC42-201ENST00000315554 SAMD3Q8N6K7 520 aa9□□□□□ -0.97
CDC42-201ENST00000315554 DIS3LQ8TF46 1054 aaKnown RBP9□□□□□ -0.97
CDC42-201ENST00000315554 CCDC12Q8WUD4 166 aaPredicted RBP9□□□□□ -0.97
CDC42-201ENST00000315554 COPS5Q92905 334 aa9□□□□□ -0.97
CDC42-201ENST00000315554 UIMC1Q96RL1 719 aa9□□□□□ -0.97
CDC42-201ENST00000315554 MPHOSPH6Q99547 160 aaKnown RBP9□□□□□ -0.97
CDC42-201ENST00000315554 ARID3AQ99856 593 aa9□□□□□ -0.97
CDC42-201ENST00000315554 ZMYND12Q9H0C1 365 aa9□□□□□ -0.97
CDC42-201ENST00000315554 VTA1Q9NP79 307 aa9□□□□□ -0.97
CDC42-201ENST00000315554 MAP3K20Q9NYL2 800 aaKnown RBP9□□□□□ -0.97
CDC42-201ENST00000315554 FAM184BQ9ULE4 1060 aa9□□□□□ -0.97
CDC42-201ENST00000315554 ESYT2A0FGR8 921 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 MYADML2A6NDP7 307 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 GNA11P29992 359 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 GJA8P48165 433 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 MCM2P49736 904 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 CLK2P49760 499 aaKnown RBP8.99□□□□□ -0.97
CDC42-201ENST00000315554 MRPS9P82933 396 aaKnown RBP8.99□□□□□ -0.97
CDC42-201ENST00000315554 TNFAIP2Q03169 654 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 NPY5RQ15761 445 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 VSIG10LQ86VR7 867 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 BLIDQ8IZY5 108 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 REXO1Q8N1G1 1221 aaKnown RBP8.99□□□□□ -0.97
CDC42-201ENST00000315554 FAM184AQ8NB25 1140 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 OXER1Q8TDS5 423 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 WASF1Q92558 559 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 IWS1Q96ST2 819 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 PHF20Q9BVI0 1012 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 WDR11Q9BZH6 1224 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 XPNPEP3Q9NQH7 507 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 SH3GLB2Q9NR46 395 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 PKD2L1Q9P0L9 805 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 NRBP1Q9UHY1 535 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 PCDHA4Q9UN74 947 aa8.99□□□□□ -0.97
CDC42-201ENST00000315554 FRMPD4Q14CM0 1322 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 SYNRGQ9UMZ2 1314 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 B4DLN1 442 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 DYNC1LI2O43237 492 aaPredicted RBP8.98□□□□□ -0.97
CDC42-201ENST00000315554 EIF3JO75822 258 aaKnown RBP8.98□□□□□ -0.97
CDC42-201ENST00000315554 TXNP10599 105 aaKnown RBP8.98□□□□□ -0.97
CDC42-201ENST00000315554 RARBP10826 455 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 GJB2P29033 226 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 BEX3Q00994 111 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 LY6KQ17RY6 165 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 KRT40Q6A162 431 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 CYP2W1Q8TAV3 490 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 LLPHQ9BRT6 129 aaKnown RBP8.98□□□□□ -0.97
CDC42-201ENST00000315554 MAF1Q9H063 256 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 CRISPLD2Q9H0B8 497 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 BCAS3Q9H6U6 928 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 MRVI1Q9Y6F6 885 aa8.98□□□□□ -0.97
CDC42-201ENST00000315554 KIAA0100Q14667 2235 aaKnown RBP8.98□□□□□ -0.97
CDC42-201ENST00000315554 LOC102724159A0A0B4J2E5 919 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 K7ELQ4 463 aaPredicted RBP8.97□□□□□ -0.97
CDC42-201ENST00000315554 FARP2O94887 1054 aaPredicted RBP8.97□□□□□ -0.97
CDC42-201ENST00000315554 FOSP01100 380 aaPredicted RBP8.97□□□□□ -0.97
CDC42-201ENST00000315554 C6orf222P0C671 652 aaPredicted RBP8.97□□□□□ -0.97
CDC42-201ENST00000315554 XBP1P17861 261 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 HMGN5P82970 282 aaKnown RBP8.97□□□□□ -0.97
CDC42-201ENST00000315554 ARHGAP4P98171 946 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 SEMA3FQ13275 785 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 NR5A1Q13285 461 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 AP3B2Q13367 1082 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 TRIM29Q14134 588 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 PWP2Q15269 919 aaKnown RBP8.97□□□□□ -0.97
CDC42-201ENST00000315554 EARS2Q5JPH6 523 aaKnown RBP8.97□□□□□ -0.97
CDC42-201ENST00000315554 PCNX4Q63HM2 1172 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 IQSEC1Q6DN90 963 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 TLK2Q86UE8 772 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 HSCBQ8IWL3 235 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 BICD2Q8TD16 824 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 SCFD2Q8WU76 684 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 C8orf76Q96K31 380 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 GLT8D2Q9H1C3 349 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 EHMT1Q9H9B1 1298 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 OGDHLQ9ULD0 1010 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 SMC3Q9UQE7 1217 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 CENPFP49454 3210 aa8.97□□□□□ -0.97
CDC42-201ENST00000315554 RBM47A0AV96 593 aaKnown RBP8.96□□□□□ -0.97
CDC42-201ENST00000315554 BTBD18B2RXH4 712 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 M0R2N6 131 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 MSCO60682 206 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 ADAMTS4O75173 837 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 DUSP11O75319 330 aaKnown RBP8.96□□□□□ -0.97
CDC42-201ENST00000315554 MMP1P03956 469 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 ITGB5P18084 799 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 KRT2P35908 639 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 ZNF76P36508 570 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 SREBF1P36956 1147 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms