RNA–Protein interactions for RNA: ENST00000311916.6

TWNK-201, Transcript of twinkle mtDNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWNK, Length 3,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-201ENST00000311916 SMCR8Q8TEV9 937 aaPredicted RBP13□□□□□ -0.33
TWNK-201ENST00000311916 MTMR9Q96QG7 549 aa13□□□□□ -0.33
TWNK-201ENST00000311916 IFIH1Q9BYX4 1025 aaKnown RBP13□□□□□ -0.33
TWNK-201ENST00000311916 LRRC27Q9C0I9 530 aa13□□□□□ -0.33
TWNK-201ENST00000311916 DBNDD1Q9H9R9 158 aa13□□□□□ -0.33
TWNK-201ENST00000311916 VPS18Q9P253 973 aa13□□□□□ -0.33
TWNK-201ENST00000311916 KIAA1024Q9UPX6 916 aa13□□□□□ -0.33
TWNK-201ENST00000311916 TNRC6CQ9HCJ0 1690 aaKnown RBP13□□□□□ -0.33
TWNK-201ENST00000311916 LMAN1P49257 510 aa13□□□□□ -0.33
TWNK-201ENST00000311916 SNAP25P60880 206 aa13□□□□□ -0.33
TWNK-201ENST00000311916 TUBB4BP68371 445 aa13□□□□□ -0.33
TWNK-201ENST00000311916 ARID5AQ03989 594 aa13□□□□□ -0.33
TWNK-201ENST00000311916 TEKT1Q969V4 418 aa13□□□□□ -0.33
TWNK-201ENST00000311916 MMS19Q96T76 1030 aa13□□□□□ -0.33
TWNK-201ENST00000311916 CRACR2AQ9BSW2 395 aa13□□□□□ -0.33
TWNK-201ENST00000311916 RCCD1A6NED2 376 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 hCG_1984214I3L0E3 225 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 MAN2A1Q16706 1144 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 HERC4Q5GLZ8 1057 aaPredicted RBP12.99□□□□□ -0.33
TWNK-201ENST00000311916 CCDC170Q8IYT3 715 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 MYOCDQ8IZQ8 938 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 CERS5Q8N5B7 392 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 CCDC155Q8N6L0 562 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 OTUD6BQ8N6M0 293 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 ZNF713Q8N859 430 aaPredicted RBP12.99□□□□□ -0.33
TWNK-201ENST00000311916 KANSL2Q9H9L4 492 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 PANK4Q9NVE7 773 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 PPP1R1BQ9UD71 204 aaPredicted RBP12.99□□□□□ -0.33
TWNK-201ENST00000311916 PVALEFA0A1B0GWK0 134 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 E9PMD0 336 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 ZNF185O15231 689 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 EIF4A3P38919 411 aaKnown RBP12.99□□□□□ -0.33
TWNK-201ENST00000311916 FXR2P51116 673 aaKnown RBP eCLIP12.99□□□□□ -0.33
TWNK-201ENST00000311916 NFIAQ12857 509 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 MIIPQ5JXC2 388 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 CENPPQ6IPU0 288 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 COL23A1Q86Y22 540 aaPredicted RBP12.99□□□□□ -0.33
TWNK-201ENST00000311916 CRAMP1Q96RY5 1269 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 RIC8AQ9NPQ8 531 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 PCDHA1Q9Y5I3 950 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 THSD7AQ9UPZ6 1657 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 EIF3CLB5ME19 914 aaKnown RBP12.99□□□□□ -0.33
TWNK-201ENST00000311916 TACC1O75410 805 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 CKAP4Q07065 602 aaKnown RBP12.99□□□□□ -0.33
TWNK-201ENST00000311916 NBPF9Q3BBW0 867 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 FAM26FQ5R3K3 315 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 BEND6Q5SZJ8 279 aaPredicted RBP12.99□□□□□ -0.33
TWNK-201ENST00000311916 CCDC70Q6NSX1 233 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 CDC42EP5Q6NZY7 148 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 CCDC84Q86UT8 332 aaPredicted RBP12.99□□□□□ -0.33
TWNK-201ENST00000311916 SP8Q8IXZ3 490 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 BORCS6Q96GS4 357 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 EIF3CQ99613 913 aaKnown RBP12.99□□□□□ -0.33
TWNK-201ENST00000311916 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
TWNK-201ENST00000311916 NAV1Q8NEY1 1877 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 RASSF10A6NK89 507 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 ZBTB5O15062 677 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 MAGEA1P43355 309 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 PDIA5Q14554 519 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 USH1GQ495M9 461 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 GPATCH4Q5T3I0 446 aaKnown RBP12.98□□□□□ -0.33
TWNK-201ENST00000311916 GUF1Q8N442 669 aaKnown RBP12.98□□□□□ -0.33
TWNK-201ENST00000311916 TRERF1Q96PN7 1200 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 ERGIC2Q96RQ1 377 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 SWAP70Q9UH65 585 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 PSMD14O00487 310 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 EPHB6O15197 1021 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 CCDC181Q5TID7 509 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 TRAPPC11Q7Z392 1133 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 GPBP1Q86WP2 473 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 MSANTD4Q8NCY6 345 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 ACBD3Q9H3P7 528 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 MLXIPQ9HAP2 919 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 MAST2Q6P0Q8 1798 aa12.98□□□□□ -0.33
TWNK-201ENST00000311916 NPHP3-ACAD11A0A0J9YXS1 232 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 LRRC53A6NM62 1247 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 PPP1R11O60927 126 aaPredicted RBP12.97□□□□□ -0.33
TWNK-201ENST00000311916 MOCS3O95396 460 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 KIF11P52732 1056 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 VAV2P52735 878 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 AMPD2Q01433 879 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 COASYQ13057 564 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 ORC2Q13416 577 aaPredicted RBP12.97□□□□□ -0.33
TWNK-201ENST00000311916 CASP8Q14790 479 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 MEA1Q16626 185 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 ZFPM1Q8IX07 1006 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 CCDC65Q8IXS2 484 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.97□□□□□ -0.33
TWNK-201ENST00000311916 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 PCDHA13Q9Y5I0 950 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 POTECB2RU33 542 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 H3BQF6 201 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 POLRMTO00411 1230 aaKnown RBP12.97□□□□□ -0.33
TWNK-201ENST00000311916 SHMT1P34896 483 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 STAT3P40763 770 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 GABPAQ06546 454 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 ECM1Q16610 540 aa12.97□□□□□ -0.33
TWNK-201ENST00000311916 QRICH1Q2TAL8 776 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms