RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PKN2Q16513 984 aaKnown RBP9.39□□□□□ -0.91
CHD6-201ENST00000309279 PFKFB3Q16875 520 aaPredicted RBP9.39□□□□□ -0.91
CHD6-201ENST00000309279 USH1GQ495M9 461 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 MUM1L1Q5H9M0 696 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 C1QTNF12Q5T7M4 302 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 CPLX2Q6PUV4 134 aaKnown RBP9.39□□□□□ -0.91
CHD6-201ENST00000309279 BANK1Q8NDB2 785 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 SOCS4Q8WXH5 440 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 PHKBQ93100 1093 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 ZHX3Q9H4I2 956 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 GABRQQ9UN88 632 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 MRPL11Q9Y3B7 192 aaKnown RBP9.39□□□□□ -0.91
CHD6-201ENST00000309279 TRIM17Q9Y577 477 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 PLXNA1Q9UIW2 1896 aa9.39□□□□□ -0.91
CHD6-201ENST00000309279 PFASO15067 1338 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 hCG_1984214I3L0E3 225 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 NFIBO00712 420 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 OPLAHO14841 1288 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 CDKL5O76039 1030 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 IGHA2P01877 340 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 TAL1P17542 331 aaPredicted RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 ADORA2AP29274 412 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 SLC4A3P48751 1232 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 CC2D1AQ6P1N0 951 aaPredicted RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 ZNF467Q7Z7K2 595 aaPredicted RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 SAMD3Q8N6K7 520 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 ZNF713Q8N859 430 aaPredicted RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 NECAB1Q8N987 351 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 MMP19Q99542 508 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 PPP1R12CQ9BZL4 782 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 A1CFQ9NQ94 594 aaKnown RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 AVENQ9NQS1 362 aaPredicted RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 HOMER2Q9NSB8 354 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 DIS3Q9Y2L1 958 aaKnown RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 PTPN22Q9Y2R2 807 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 RBBP6Q7Z6E9 1792 aaKnown RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 STK36Q9NRP7 1315 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 hCG_1642624A0A1W2PR95 340 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 COBLO75128 1261 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 SCG2P13521 617 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 FLT3P36888 993 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 RGS2P41220 211 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 ABL2P42684 1182 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 SSRP1Q08945 709 aaKnown RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 ZNF792Q3KQV3 632 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 GJC2Q5T442 439 aaPredicted RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 L1TD1Q5T7N2 865 aaKnown RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 WWC2Q6AWC2 1192 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 MCF2L2Q86YR7 1114 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 TRIM22Q8IYM9 498 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 ANKRD35Q8N283 1001 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 FAM133AQ8N9E0 248 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 PXYLP1Q8TE99 480 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 PIBF1Q8WXW3 757 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 SNX21Q969T3 373 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 TMX3Q96JJ7 454 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 LLPHQ9BRT6 129 aaKnown RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 SLC26A6Q9BXS9 759 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 SEZ6LQ9BYH1 1024 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 RETREG1Q9H6L5 497 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 BARHL2Q9NY43 387 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 SLC5A4Q9NY91 659 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 CYP39A1Q9NYL5 469 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 NOL7Q9UMY1 257 aaKnown RBP9.38□□□□□ -0.91
CHD6-201ENST00000309279 LCTP09848 1927 aa9.38□□□□□ -0.91
CHD6-201ENST00000309279 PIK3CDO00329 1044 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 IFRD1O00458 451 aaPredicted RBP9.37□□□□□ -0.91
CHD6-201ENST00000309279 HIP1RO75146 1068 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 DEXIO95424 95 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 PGK2P07205 417 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 PDGFRBP09619 1106 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 HSD17B4P51659 736 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 PSMC1P62191 440 aaKnown RBP9.37□□□□□ -0.91
CHD6-201ENST00000309279 RPS6P62753 249 aaKnown RBP9.37□□□□□ -0.91
CHD6-201ENST00000309279 AKAP17AQ02040 695 aaKnown RBP9.37□□□□□ -0.91
CHD6-201ENST00000309279 BAATQ14032 418 aaPredicted RBP9.37□□□□□ -0.91
CHD6-201ENST00000309279 TYW1BQ6NUM6 668 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 FBXO46Q6PJ61 603 aaPredicted RBP9.37□□□□□ -0.91
CHD6-201ENST00000309279 RNF207Q6ZRF8 634 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 DPP9Q86TI2 863 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 SLC43A3Q8NBI5 491 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 NSUN7Q8NE18 718 aaKnown RBP9.37□□□□□ -0.91
CHD6-201ENST00000309279 SMARCC2Q8TAQ2 1214 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 NPLOC4Q8TAT6 608 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 TBC1D5Q92609 795 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 GPKOWQ92917 476 aaPredicted RBP eCLIP9.37□□□□□ -0.91
CHD6-201ENST00000309279 DDX11Q96FC9 970 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 APBA2Q99767 749 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 SH3GLB2Q9NR46 395 aa9.37□□□□□ -0.91
CHD6-201ENST00000309279 STXBP3O00186 592 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 MEIS2O14770 477 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 PPFIA3O75145 1194 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 FDPSP14324 419 aaKnown RBP9.36□□□□□ -0.91
CHD6-201ENST00000309279 CYP2B6P20813 491 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 OLFML2BQ68BL8 750 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 CCSAPQ6IQ19 270 aaPredicted RBP9.36□□□□□ -0.91
CHD6-201ENST00000309279 PPP1R18Q6NYC8 613 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 MAMDC4Q6UXC1 1216 aa9.36□□□□□ -0.91
CHD6-201ENST00000309279 NSMFQ6X4W1 530 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms