RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 SPDYE2Q495Y8 402 aa20.22■□□□□ 0.83
UBXN2A-201ENST00000309033 RINT1Q6NUQ1 792 aa20.22■□□□□ 0.83
UBXN2A-201ENST00000309033 BBOX1O75936 387 aa20.22■□□□□ 0.83
UBXN2A-201ENST00000309033 IFNAR2P48551 515 aa20.22■□□□□ 0.83
UBXN2A-201ENST00000309033 RPS6KA2Q15349 733 aa20.22■□□□□ 0.83
UBXN2A-201ENST00000309033 EMILIN3Q9NT22 766 aa20.22■□□□□ 0.83
UBXN2A-201ENST00000309033 GOLGA8SH3BPF8 625 aa20.22■□□□□ 0.83
UBXN2A-201ENST00000309033 HEXIM1O94992 359 aaKnown RBP20.22■□□□□ 0.83
UBXN2A-201ENST00000309033 DDIT3P35638 169 aa20.22■□□□□ 0.83
UBXN2A-201ENST00000309033 SLC7A3Q8WY07 619 aa20.22■□□□□ 0.83
UBXN2A-201ENST00000309033 FAM193BQ96PV7 902 aaPredicted RBP20.22■□□□□ 0.83
UBXN2A-201ENST00000309033 CASQ2O14958 399 aaPredicted RBP20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 PLA2G4BP0C869 781 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 CYP2D6P10635 497 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 ATP1A3P13637 1013 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 EIF4A3P38919 411 aaKnown RBP20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 SH2D4BQ5SQS7 431 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 CC2D2BQ6DHV5 1058 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 MIS18BP1Q6P0N0 1132 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 ANKARQ7Z5J8 1434 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 NEDD4P46934 1319 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 CTTNQ14247 550 aaKnown RBP20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 DPP9Q86TI2 863 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 LIG3P49916 1009 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 RASSF2P50749 326 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 FKBP3Q00688 224 aaKnown RBP20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 VSTM4Q8IW00 320 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 ANKRD36BP1Q96IX9 119 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 TRPC5Q9UL62 973 aaPredicted RBP20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 UBN2Q6ZU65 1347 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 SNAP23O00161 211 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 GCFC2P16383 781 aaKnown RBP20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 OSTNP61366 133 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 DYNLT1P63172 113 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 NACC1Q96RE7 527 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 VCXQ9H320 206 aa20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 PRDM15P57071 1507 aaPredicted RBP20.21■□□□□ 0.83
UBXN2A-201ENST00000309033 SH3RF3Q8TEJ3 882 aaPredicted RBP20.2■□□□□ 0.83
UBXN2A-201ENST00000309033 STK17AQ9UEE5 414 aa20.2■□□□□ 0.83
UBXN2A-201ENST00000309033 MAGED2Q9UNF1 606 aaPredicted RBP20.2■□□□□ 0.83
UBXN2A-201ENST00000309033 CUL4BQ13620 913 aa20.2■□□□□ 0.82
UBXN2A-201ENST00000309033 TOB2Q14106 344 aaPredicted RBP20.2■□□□□ 0.82
UBXN2A-201ENST00000309033 TBC1D10CQ8IV04 446 aa20.2■□□□□ 0.82
UBXN2A-201ENST00000309033 MED4Q9NPJ6 270 aa20.2■□□□□ 0.82
UBXN2A-201ENST00000309033 PTCH1Q13635 1447 aa20.2■□□□□ 0.82
UBXN2A-201ENST00000309033 H7C1W4 665 aa20.2■□□□□ 0.82
UBXN2A-201ENST00000309033 MTERF2Q49AM1 385 aa20.2■□□□□ 0.82
UBXN2A-201ENST00000309033 CCND2P30279 289 aa20.2■□□□□ 0.82
UBXN2A-201ENST00000309033 WDR11Q9BZH6 1224 aa20.2■□□□□ 0.82
UBXN2A-201ENST00000309033 ABCA8O94911 1581 aa20.2■□□□□ 0.82
UBXN2A-201ENST00000309033 LPXNO60711 386 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 PLTPP55058 493 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 BPIFB4P59827 614 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 C4orf50Q6ZRC1 276 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 PDZD4Q76G19 769 aaPredicted RBP20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 SYNE4Q8N205 404 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 ENOX1Q8TC92 643 aaKnown RBP20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 SESN3P58005 492 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 CYP27A1Q02318 531 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 PPP2R5AQ15172 486 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 MIPOL1Q8TD10 442 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 TSPOAP1O95153 1857 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 TFAMQ00059 246 aaKnown RBP20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 CCDC38Q502W7 563 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 TRIM68Q6AZZ1 485 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 BSDC1Q9NW68 430 aaPredicted RBP20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 ATP8A1Q9Y2Q0 1164 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 SHROOM2Q13796 1616 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 BAG2O95816 211 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 CCT5P48643 541 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 MIS12Q9H081 205 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 THAP9Q9H5L6 903 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 PNMA2Q9UL42 364 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 GOLGA8IPA6NC78 632 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 GOLGA8JA6NMD2 632 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 SFI1A8K8P3 1242 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 CACNB3P54284 484 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 GRAPQ13588 217 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 TMCO4Q5TGY1 634 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 BBOF1Q8ND07 529 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 GRAPLQ8TC17 118 aaPredicted RBP20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 RAB3IPQ96QF0 476 aaPredicted RBP20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 STRBPQ96SI9 672 aaKnown RBP20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 SMYD2Q9NRG4 433 aa20.19■□□□□ 0.82
UBXN2A-201ENST00000309033 USP14P54578 494 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 RETREG2Q8NC44 543 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 LRRC8CQ8TDW0 803 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 PHLPP2Q6ZVD8 1323 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 hCG_1984214I3L0E3 225 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 MUM1Q2TAK8 710 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 SGO2Q562F6 1265 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 ZNF713Q8N859 430 aaPredicted RBP20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 BEGAINQ9BUH8 593 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 PI4KBQ9UBF8 816 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 PCDHA13Q9Y5I0 950 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 LIFRP42702 1097 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 TRIP13Q15645 432 aaPredicted RBP20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 RPS6KC1Q96S38 1066 aa20.18■□□□□ 0.82
UBXN2A-201ENST00000309033 NXF1Q9UBU9 619 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms