RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 GIMAP8Q8ND71 665 aaPredicted RBP13.45□□□□□ -0.26
TPM3-202ENST00000302206 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.45□□□□□ -0.26
TPM3-202ENST00000302206 ERMNQ8TAM6 284 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 CLEC4DQ8WXI8 215 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 LARP4BQ92615 738 aaKnown RBP13.45□□□□□ -0.26
TPM3-202ENST00000302206 DCPSQ96C86 337 aaKnown RBP13.45□□□□□ -0.26
TPM3-202ENST00000302206 MED15Q96RN5 788 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 TANGO6Q9C0B7 1094 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 RPAP3Q9H6T3 665 aaPredicted RBP13.45□□□□□ -0.26
TPM3-202ENST00000302206 PARP14Q460N5 1801 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 RBBP6Q7Z6E9 1792 aaKnown RBP13.45□□□□□ -0.26
TPM3-202ENST00000302206 PAPPA2Q9BXP8 1791 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 IGLV3-22A0A075B6J6 115 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 FAM86B1E9PN63 330 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 USP2O75604 605 aaPredicted RBP13.44□□□□□ -0.26
TPM3-202ENST00000302206 FLOT1O75955 427 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 FAM86B2P0C5J1 330 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 ZNF76P36508 570 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 CCT6AP40227 531 aaKnown RBP13.44□□□□□ -0.26
TPM3-202ENST00000302206 MAP3K9P80192 1104 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 SETQ01105 290 aaPredicted RBP13.44□□□□□ -0.26
TPM3-202ENST00000302206 SPIRE1Q08AE8 756 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 PAK1Q13153 545 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 STIM1Q13586 685 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 PRR16Q569H4 304 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 PRPF38BQ5VTL8 546 aaKnown RBP13.44□□□□□ -0.26
TPM3-202ENST00000302206 CDKAL1Q5VV42 579 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 HAUS3Q68CZ6 603 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 NIPA1Q7RTP0 329 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 CCDC186Q7Z3E2 898 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 ADSSL1Q8N142 457 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
TPM3-202ENST00000302206 ZKSCAN4Q969J2 545 aaPredicted RBP13.44□□□□□ -0.26
TPM3-202ENST00000302206 DHTKD1Q96HY7 919 aaPredicted RBP13.44□□□□□ -0.26
TPM3-202ENST00000302206 HHIPL1Q96JK4 782 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 AGBL1Q96MI9 1066 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 PLIN2Q99541 437 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 ADAMTS5Q9UNA0 930 aa13.44□□□□□ -0.26
TPM3-202ENST00000302206 CTDP1Q9Y5B0 961 aaPredicted RBP13.44□□□□□ -0.26
TPM3-202ENST00000302206 FRMPD4Q14CM0 1322 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 ATP2A1O14983 1001 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 MSH4O15457 936 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 CELF2O95319 508 aaKnown RBP13.43□□□□□ -0.26
TPM3-202ENST00000302206 SERPINC1P01008 464 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 ATP1A3P13637 1013 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 TAL1P17542 331 aaPredicted RBP13.43□□□□□ -0.26
TPM3-202ENST00000302206 MUTP22033 750 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 PTGS1P23219 599 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 UBASH3AP57075 661 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 ASIC1P78348 528 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 UNC13DQ70J99 1090 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 KRT26Q7Z3Y9 468 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 FCHSD1Q86WN1 690 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 SULF1Q8IWU6 871 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 TBC1D5Q92609 795 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 SLC5A5Q92911 643 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 NUDT12Q9BQG2 462 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 KCNF1Q9H3M0 494 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 EXOC1Q9NV70 894 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 TMOD4Q9NZQ9 345 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 VAV3Q9UKW4 847 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 AFG3L2Q9Y4W6 797 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 ZHX2Q9Y6X8 837 aa13.43□□□□□ -0.26
TPM3-202ENST00000302206 MEIS1O00470 390 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 VWA5AO00534 786 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 PPP1R12BO60237 982 aaPredicted RBP13.42□□□□□ -0.26
TPM3-202ENST00000302206 BCRP11274 1271 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 CDK11BP21127 795 aaKnown RBP13.42□□□□□ -0.26
TPM3-202ENST00000302206 RPA1P27694 616 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 DSG3P32926 999 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 PRCPP42785 496 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 SOX10P56693 466 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 SPAG1Q07617 926 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 PSMD2Q13200 908 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 MCM6Q14566 821 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 TKFCQ3LXA3 575 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 CEP55Q53EZ4 464 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 PRAMEF18Q5VWM3 479 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 FOXR2Q6PJQ5 311 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 CATSPERGQ6ZRH7 1159 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 TRMT44Q8IYL2 757 aaKnown RBP13.42□□□□□ -0.26
TPM3-202ENST00000302206 REPS2Q8NFH8 660 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 NOC3LQ8WTT2 800 aaKnown RBP13.42□□□□□ -0.26
TPM3-202ENST00000302206 NELFBQ8WX92 580 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 CTAGE1Q96RT6 745 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 POLR3CQ9BUI4 534 aaPredicted RBP13.42□□□□□ -0.26
TPM3-202ENST00000302206 CTNND2Q9UQB3 1225 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 RLFQ13129 1914 aa13.42□□□□□ -0.26
TPM3-202ENST00000302206 SMCHD1A6NHR9 2005 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 MYMKA6NI61 221 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 PSMA7O14818 248 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 PSMD10O75832 226 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 PDE4DQ08499 809 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 NOGQ13253 232 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 PPP2R5CQ13362 524 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 COG2Q14746 738 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 CCDC144BQ3MJ40 725 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 KLHL10Q6JEL2 608 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 XRRA1Q6P2D8 792 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 VSTM4Q8IW00 320 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms