RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 PRCPP42785 496 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 TTC19Q6DKK2 380 aaPredicted RBP21.05■□□□□ 0.96
TSR1-201ENST00000301364 PROM2Q8N271 834 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 DHX36Q9H2U1 1008 aaKnown RBP21.05■□□□□ 0.96
TSR1-201ENST00000301364 KRT19P08727 400 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 VPS41P49754 854 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 LMNB2Q03252 620 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 DIXDC1Q155Q3 683 aa21.04■□□□□ 0.96
TSR1-201ENST00000301364 RNF10Q8N5U6 811 aaKnown RBP21.04■□□□□ 0.96
TSR1-201ENST00000301364 CCDC197Q8NCU1 140 aa21.04■□□□□ 0.96
TSR1-201ENST00000301364 PNPLA7Q6ZV29 1317 aa21.04■□□□□ 0.96
TSR1-201ENST00000301364 NAA30Q147X3 362 aaPredicted RBP21.04■□□□□ 0.96
TSR1-201ENST00000301364 TRIM11Q96F44 468 aa21.04■□□□□ 0.96
TSR1-201ENST00000301364 GCNT4Q9P109 453 aa21.04■□□□□ 0.96
TSR1-201ENST00000301364 CASP1P29466 404 aa21.04■□□□□ 0.96
TSR1-201ENST00000301364 CACNB1Q02641 598 aaPredicted RBP21.04■□□□□ 0.96
TSR1-201ENST00000301364 DLATP10515 647 aaKnown RBP21.04■□□□□ 0.96
TSR1-201ENST00000301364 ARL1P40616 181 aaPredicted RBP21.04■□□□□ 0.96
TSR1-201ENST00000301364 NIM1KQ8IY84 436 aa21.04■□□□□ 0.96
TSR1-201ENST00000301364 TMEM206Q9H813 350 aa21.04■□□□□ 0.96
TSR1-201ENST00000301364 CAMSAP1Q5T5Y3 1602 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 NEXMIFQ5QGS0 1516 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 PRPF6O94906 941 aaKnown RBP21.03■□□□□ 0.96
TSR1-201ENST00000301364 SLC16A2P36021 539 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 HNRNPH2P55795 449 aaKnown RBP21.03■□□□□ 0.96
TSR1-201ENST00000301364 FAM81BQ96LP2 452 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 CNOT10Q9H9A5 744 aaKnown RBP21.03■□□□□ 0.96
TSR1-201ENST00000301364 TSPOAP1O95153 1857 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 IRX5P78411 483 aaPredicted RBP21.03■□□□□ 0.96
TSR1-201ENST00000301364 CCZ1BP86790 482 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 CCZ1P86791 482 aaPredicted RBP21.03■□□□□ 0.96
TSR1-201ENST00000301364 IFT88Q13099 833 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 UHMK1Q8TAS1 419 aaKnown RBP21.03■□□□□ 0.96
TSR1-201ENST00000301364 NBPF26B4DH59 902 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 SUN1O94901 812 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 CUL1Q13616 776 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 CDC37Q16543 378 aaPredicted RBP21.03■□□□□ 0.96
TSR1-201ENST00000301364 NBPF10Q6P3W6 841 aaKnown RBP21.03■□□□□ 0.96
TSR1-201ENST00000301364 NBPF15Q8N660 670 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 ADAMTS1Q9UHI8 967 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 CPDO75976 1380 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 CCDC188H7C350 402 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 POLR2BP30876 1174 aaKnown RBP21.03■□□□□ 0.96
TSR1-201ENST00000301364 CCDC38Q502W7 563 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 ALKBH5Q6P6C2 394 aaKnown RBP21.03■□□□□ 0.96
TSR1-201ENST00000301364 METTL16Q86W50 562 aaKnown RBP21.03■□□□□ 0.96
TSR1-201ENST00000301364 NLGN1Q8N2Q7 840 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 ZNF577Q9BSK1 485 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 PLA2G12BQ9BX93 195 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 SPZ1Q9BXG8 430 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 GJA3Q9Y6H8 435 aa21.03■□□□□ 0.96
TSR1-201ENST00000301364 DAPK3O43293 454 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 DHX9Q08211 1270 aaKnown RBP21.02■□□□□ 0.96
TSR1-201ENST00000301364 GABPB2Q8TAK5 448 aaPredicted RBP21.02■□□□□ 0.96
TSR1-201ENST00000301364 ATP2A3Q93084 1043 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 ACCSQ96QU6 501 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 MRFAP1Q9Y605 127 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 FAM170AA1A519 330 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 HIP1RO75146 1068 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 NRXN1Q9ULB1 1477 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 TEX33O43247 280 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 PSMC4P43686 418 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 EIF3BP55884 814 aaKnown RBP21.02■□□□□ 0.96
TSR1-201ENST00000301364 GRAPQ13588 217 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 SCARF1Q14162 830 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 GRAPLQ8TC17 118 aaPredicted RBP21.02■□□□□ 0.96
TSR1-201ENST00000301364 ATP8A1Q9Y2Q0 1164 aa21.02■□□□□ 0.96
TSR1-201ENST00000301364 A0A1W2PQC6 194 aa21.02■□□□□ 0.95
TSR1-201ENST00000301364 HMGB1P1B2RPK0 211 aaPredicted RBP21.02■□□□□ 0.95
TSR1-201ENST00000301364 RASA3Q14644 834 aa21.02■□□□□ 0.95
TSR1-201ENST00000301364 POMGNT1Q8WZA1 660 aa21.02■□□□□ 0.95
TSR1-201ENST00000301364 CCPG1Q9ULG6 757 aa21.02■□□□□ 0.95
TSR1-201ENST00000301364 STK38LQ9Y2H1 464 aa21.02■□□□□ 0.95
TSR1-201ENST00000301364 RIPOR2Q9Y4F9 1068 aa21.02■□□□□ 0.95
TSR1-201ENST00000301364 TRIM49BA6NDI0 452 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 PPEF1O14829 653 aaPredicted RBP21.01■□□□□ 0.95
TSR1-201ENST00000301364 ATP2C1P98194 919 aaPredicted RBP21.01■□□□□ 0.95
TSR1-201ENST00000301364 RAB3IL1Q8TBN0 382 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 MXD3Q9BW11 206 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 IL25Q9H293 177 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 PARVGQ9HBI0 331 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 AS3MTQ9HBK9 375 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 DCP1AQ9NPI6 582 aaPredicted RBP21.01■□□□□ 0.95
TSR1-201ENST00000301364 CEP72Q9P209 647 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 ZNF148Q9UQR1 794 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 CLIC2O15247 247 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 GFPT2O94808 682 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 BMP3P12645 472 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 ATF7P17544 494 aaPredicted RBP21.01■□□□□ 0.95
TSR1-201ENST00000301364 NR1D1P20393 614 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 PLTPP55058 493 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 SYNE4Q8N205 404 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.01■□□□□ 0.95
TSR1-201ENST00000301364 VCXQ9H320 206 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 FBXO2Q9UK22 296 aaPredicted RBP21.01■□□□□ 0.95
TSR1-201ENST00000301364 E4F1Q66K89 784 aaPredicted RBP21.01■□□□□ 0.95
TSR1-201ENST00000301364 ZBTB8OSQ8IWT0 167 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 CTAGE3PQ8IX95 158 aa21.01■□□□□ 0.95
TSR1-201ENST00000301364 SDCCAG8Q86SQ7 713 aaPredicted RBP21.01■□□□□ 0.95
TSR1-201ENST00000301364 TMEM47Q9BQJ4 181 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms