RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SEC23AQ15436 765 aa24.23■■□□□ 1.47
SMCO4-201ENST00000298966 NFXL1Q6ZNB6 911 aa24.23■■□□□ 1.47
SMCO4-201ENST00000298966 DGKHQ86XP1 1220 aa24.23■■□□□ 1.47
SMCO4-201ENST00000298966 ANKS1AQ92625 1134 aa24.23■■□□□ 1.47
SMCO4-201ENST00000298966 INCENPQ9NQS7 918 aa24.23■■□□□ 1.47
SMCO4-201ENST00000298966 STX8Q9UNK0 236 aa24.23■■□□□ 1.47
SMCO4-201ENST00000298966 SLC12A7Q9Y666 1083 aa24.23■■□□□ 1.47
SMCO4-201ENST00000298966 TET1Q8NFU7 2136 aa24.22■■□□□ 1.47
SMCO4-201ENST00000298966 LOC102724159A0A0B4J2E5 919 aa24.22■■□□□ 1.47
SMCO4-201ENST00000298966 CALM1P0DP23 149 aa24.22■■□□□ 1.47
SMCO4-201ENST00000298966 CALM2P0DP24 149 aa24.22■■□□□ 1.47
SMCO4-201ENST00000298966 CALM3P0DP25 149 aa24.22■■□□□ 1.47
SMCO4-201ENST00000298966 ALDH5A1P51649 535 aaPredicted RBP24.22■■□□□ 1.47
SMCO4-201ENST00000298966 HMGN5P82970 282 aaKnown RBP24.22■■□□□ 1.47
SMCO4-201ENST00000298966 BFSP2Q13515 415 aa24.22■■□□□ 1.47
SMCO4-201ENST00000298966 BAATQ14032 418 aaPredicted RBP24.22■■□□□ 1.47
SMCO4-201ENST00000298966 PWP2Q15269 919 aaKnown RBP24.22■■□□□ 1.47
SMCO4-201ENST00000298966 NBPF20Q3BBV1 942 aa24.22■■□□□ 1.47
SMCO4-201ENST00000298966 CPLX2Q6PUV4 134 aaKnown RBP24.22■■□□□ 1.47
SMCO4-201ENST00000298966 MUC6Q6W4X9 2439 aa24.21■■□□□ 1.47
SMCO4-201ENST00000298966 RBM47A0AV96 593 aaKnown RBP24.21■■□□□ 1.47
SMCO4-201ENST00000298966 GOLGA8BA8MQT2 603 aa24.21■■□□□ 1.47
SMCO4-201ENST00000298966 ZBTB43O43298 467 aa24.21■■□□□ 1.47
SMCO4-201ENST00000298966 GPR37L1O60883 481 aa24.21■■□□□ 1.47
SMCO4-201ENST00000298966 BAIAP3O94812 1187 aa24.21■■□□□ 1.47
SMCO4-201ENST00000298966 ARHGEF15O94989 841 aa24.21■■□□□ 1.47
SMCO4-201ENST00000298966 ICAM1P05362 532 aa24.21■■□□□ 1.47
SMCO4-201ENST00000298966 PDCP20941 246 aa24.21■■□□□ 1.47
SMCO4-201ENST00000298966 NFRKBQ6P4R8 1299 aa24.21■■□□□ 1.47
SMCO4-201ENST00000298966 APOA5Q6Q788 366 aa24.21■■□□□ 1.47
SMCO4-201ENST00000298966 LARP6Q9BRS8 491 aaKnown RBP24.21■■□□□ 1.47
SMCO4-201ENST00000298966 NOD1Q9Y239 953 aa24.21■■□□□ 1.47
SMCO4-201ENST00000298966 CCDC196A0A1B0GTZ2 297 aa24.2■■□□□ 1.46
SMCO4-201ENST00000298966 KPNA6O60684 536 aa24.2■■□□□ 1.46
SMCO4-201ENST00000298966 KCNJ6P48051 423 aa24.2■■□□□ 1.46
SMCO4-201ENST00000298966 PTPN11Q06124 597 aaPredicted RBP24.2■■□□□ 1.46
SMCO4-201ENST00000298966 IFIT1BQ5T764 474 aaKnown RBP24.2■■□□□ 1.46
SMCO4-201ENST00000298966 MTMR7Q9Y216 660 aa24.2■■□□□ 1.46
SMCO4-201ENST00000298966 TRIP12Q14669 1992 aaPredicted RBP24.2■■□□□ 1.46
SMCO4-201ENST00000298966 COL4A4P53420 1690 aaPredicted RBP24.19■■□□□ 1.46
SMCO4-201ENST00000298966 NKRFO15226 690 aaKnown RBP eCLIP24.19■■□□□ 1.46
SMCO4-201ENST00000298966 CDKL5O76039 1030 aa24.19■■□□□ 1.46
SMCO4-201ENST00000298966 DDAH1O94760 285 aa24.19■■□□□ 1.46
SMCO4-201ENST00000298966 SCRN1Q12765 414 aa24.19■■□□□ 1.46
SMCO4-201ENST00000298966 CCDC96Q2M329 555 aa24.19■■□□□ 1.46
SMCO4-201ENST00000298966 ENAHQ8N8S7 591 aaPredicted RBP24.19■■□□□ 1.46
SMCO4-201ENST00000298966 NECAB1Q8N987 351 aa24.19■■□□□ 1.46
SMCO4-201ENST00000298966 BRPF3Q9ULD4 1205 aa24.19■■□□□ 1.46
SMCO4-201ENST00000298966 PTPDC1A2A3K4 754 aa24.18■■□□□ 1.46
SMCO4-201ENST00000298966 METAP2P50579 478 aaKnown RBP eCLIP24.18■■□□□ 1.46
SMCO4-201ENST00000298966 ST3GAL1Q11201 340 aa24.18■■□□□ 1.46
SMCO4-201ENST00000298966 STK3Q13188 491 aa24.18■■□□□ 1.46
SMCO4-201ENST00000298966 CATIPQ7Z7H3 387 aa24.18■■□□□ 1.46
SMCO4-201ENST00000298966 RGS22Q8NE09 1264 aa24.18■■□□□ 1.46
SMCO4-201ENST00000298966 PPP1R13LQ8WUF5 828 aa24.18■■□□□ 1.46
SMCO4-201ENST00000298966 MPHOSPH6Q99547 160 aaKnown RBP24.18■■□□□ 1.46
SMCO4-201ENST00000298966 LMCD1Q9NZU5 365 aa24.18■■□□□ 1.46
SMCO4-201ENST00000298966 NAP1L2Q9ULW6 460 aaPredicted RBP24.18■■□□□ 1.46
SMCO4-201ENST00000298966 FAM86C2PA6NEL3 165 aa24.17■■□□□ 1.46
SMCO4-201ENST00000298966 LPXNO60711 386 aa24.17■■□□□ 1.46
SMCO4-201ENST00000298966 RASGRP2Q7LDG7 609 aa24.17■■□□□ 1.46
SMCO4-201ENST00000298966 CCDC155Q8N6L0 562 aa24.17■■□□□ 1.46
SMCO4-201ENST00000298966 SMARCC2Q8TAQ2 1214 aa24.17■■□□□ 1.46
SMCO4-201ENST00000298966 DCAF4Q8WV16 495 aa24.17■■□□□ 1.46
SMCO4-201ENST00000298966 KHSRPQ92945 711 aaKnown RBP eCLIP24.17■■□□□ 1.46
SMCO4-201ENST00000298966 MAP3K14Q99558 947 aa24.17■■□□□ 1.46
SMCO4-201ENST00000298966 ZBED2Q9BTP6 218 aa24.17■■□□□ 1.46
SMCO4-201ENST00000298966 RANBP17Q9H2T7 1088 aaKnown RBP24.17■■□□□ 1.46
SMCO4-201ENST00000298966 PTPRSQ13332 1948 aa24.17■■□□□ 1.46
SMCO4-201ENST00000298966 A6NJR5 290 aa24.16■■□□□ 1.46
SMCO4-201ENST00000298966 NFIBO00712 420 aa24.16■■□□□ 1.46
SMCO4-201ENST00000298966 CPLX1O14810 134 aa24.16■■□□□ 1.46
SMCO4-201ENST00000298966 PDE4DQ08499 809 aa24.16■■□□□ 1.46
SMCO4-201ENST00000298966 ZNF654Q8IZM8 581 aa24.16■■□□□ 1.46
SMCO4-201ENST00000298966 SCFD2Q8WU76 684 aa24.16■■□□□ 1.46
SMCO4-201ENST00000298966 ZKSCAN3Q9BRR0 538 aa24.16■■□□□ 1.46
SMCO4-201ENST00000298966 C11orf16Q9NQ32 467 aa24.16■■□□□ 1.46
SMCO4-201ENST00000298966 GOLGA8AA7E2F4 631 aa24.15■■□□□ 1.46
SMCO4-201ENST00000298966 PI4K2BG5E9Z4 385 aa24.15■■□□□ 1.46
SMCO4-201ENST00000298966 CALML3P27482 149 aa24.15■■□□□ 1.46
SMCO4-201ENST00000298966 GJB2P29033 226 aa24.15■■□□□ 1.46
SMCO4-201ENST00000298966 NOVP48745 357 aa24.15■■□□□ 1.46
SMCO4-201ENST00000298966 SPRED2Q7Z698 418 aa24.15■■□□□ 1.46
SMCO4-201ENST00000298966 IL17RBQ9NRM6 502 aa24.15■■□□□ 1.46
SMCO4-201ENST00000298966 RBM28Q9NW13 759 aaKnown RBP24.15■■□□□ 1.46
SMCO4-201ENST00000298966 NMT2O60551 498 aa24.14■■□□□ 1.45
SMCO4-201ENST00000298966 SLC16A2P36021 539 aa24.14■■□□□ 1.45
SMCO4-201ENST00000298966 CHMP4BP1P59074 171 aa24.14■■□□□ 1.45
SMCO4-201ENST00000298966 WDR5P61964 334 aaKnown RBP24.14■■□□□ 1.45
SMCO4-201ENST00000298966 SYDE2Q5VT97 1194 aa24.14■■□□□ 1.45
SMCO4-201ENST00000298966 SLC30A10Q6XR72 485 aa24.14■■□□□ 1.45
SMCO4-201ENST00000298966 CAGE1Q8TC20 777 aa24.14■■□□□ 1.45
SMCO4-201ENST00000298966 AFAP1L1Q8TED9 768 aa24.14■■□□□ 1.45
SMCO4-201ENST00000298966 GDPD5Q8WTR4 605 aa24.14■■□□□ 1.45
SMCO4-201ENST00000298966 LCHNA4D1U4 455 aa24.13■■□□□ 1.45
SMCO4-201ENST00000298966 CCT2P78371 535 aaKnown RBP24.13■■□□□ 1.45
SMCO4-201ENST00000298966 PTGISQ16647 500 aa24.13■■□□□ 1.45
SMCO4-201ENST00000298966 RTN1Q16799 776 aa24.13■■□□□ 1.45
SMCO4-201ENST00000298966 TTBK2Q6IQ55 1244 aa24.13■■□□□ 1.45
SMCO4-201ENST00000298966 BTNL9Q6UXG8 535 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms