RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.67■■□□□ 1.7
LINC01116-201ENST00000295549 NKRFO15226 690 aaKnown RBP eCLIP25.67■■□□□ 1.7
LINC01116-201ENST00000295549 TXNP10599 105 aaKnown RBP25.67■■□□□ 1.7
LINC01116-201ENST00000295549 SMPD1P17405 629 aa25.67■■□□□ 1.7
LINC01116-201ENST00000295549 SEMA3FQ13275 785 aa25.67■■□□□ 1.7
LINC01116-201ENST00000295549 Q4G0T1 1027 aa25.67■■□□□ 1.7
LINC01116-201ENST00000295549 LENG9Q96B70 501 aa25.67■■□□□ 1.7
LINC01116-201ENST00000295549 SENP7Q9BQF6 1050 aa25.67■■□□□ 1.7
LINC01116-201ENST00000295549 ADCY6O43306 1168 aa25.66■■□□□ 1.7
LINC01116-201ENST00000295549 CCNT1O60563 726 aaKnown RBP25.66■■□□□ 1.7
LINC01116-201ENST00000295549 DUSP11O75319 330 aaKnown RBP25.66■■□□□ 1.7
LINC01116-201ENST00000295549 ARIH2O95376 493 aa25.66■■□□□ 1.7
LINC01116-201ENST00000295549 PRR16Q569H4 304 aa25.66■■□□□ 1.7
LINC01116-201ENST00000295549 FERMT3Q86UX7 667 aa25.66■■□□□ 1.7
LINC01116-201ENST00000295549 PLA2G4DQ86XP0 818 aa25.66■■□□□ 1.7
LINC01116-201ENST00000295549 ZSCAN16Q9H4T2 348 aaPredicted RBP25.66■■□□□ 1.7
LINC01116-201ENST00000295549 NOL7Q9UMY1 257 aaKnown RBP25.66■■□□□ 1.7
LINC01116-201ENST00000295549 GNEQ9Y223 722 aaKnown RBP25.66■■□□□ 1.7
LINC01116-201ENST00000295549 Q9Y3F1 56 aa25.66■■□□□ 1.7
LINC01116-201ENST00000295549 MYH7BA7E2Y1 1941 aa25.65■■□□□ 1.7
LINC01116-201ENST00000295549 TDP2O95551 362 aa25.65■■□□□ 1.7
LINC01116-201ENST00000295549 MYCP01106 439 aaPredicted RBP25.65■■□□□ 1.7
LINC01116-201ENST00000295549 RARBP10826 455 aa25.65■■□□□ 1.7
LINC01116-201ENST00000295549 LY6KQ17RY6 165 aa25.65■■□□□ 1.7
LINC01116-201ENST00000295549 TMEM63BQ5T3F8 832 aa25.65■■□□□ 1.7
LINC01116-201ENST00000295549 LHX8Q68G74 356 aa25.65■■□□□ 1.7
LINC01116-201ENST00000295549 DDX25Q9UHL0 483 aaKnown RBP25.65■■□□□ 1.7
LINC01116-201ENST00000295549 ZSCAN22P10073 491 aaPredicted RBP25.64■■□□□ 1.7
LINC01116-201ENST00000295549 ARP10275 920 aa25.64■■□□□ 1.7
LINC01116-201ENST00000295549 DDIT3P35638 169 aa25.64■■□□□ 1.7
LINC01116-201ENST00000295549 SP2Q02086 613 aa25.64■■□□□ 1.7
LINC01116-201ENST00000295549 RESTQ13127 1097 aa25.64■■□□□ 1.7
LINC01116-201ENST00000295549 RILPL1Q5EBL4 403 aa25.64■■□□□ 1.7
LINC01116-201ENST00000295549 GJB1P08034 283 aa25.63■■□□□ 1.69
LINC01116-201ENST00000295549 TOB1P50616 345 aaPredicted RBP25.63■■□□□ 1.69
LINC01116-201ENST00000295549 ORC2Q13416 577 aaPredicted RBP25.63■■□□□ 1.69
LINC01116-201ENST00000295549 PKP1Q13835 747 aa25.63■■□□□ 1.69
LINC01116-201ENST00000295549 NEDD9Q14511 834 aa25.63■■□□□ 1.69
LINC01116-201ENST00000295549 GIMAP8Q8ND71 665 aaPredicted RBP25.63■■□□□ 1.69
LINC01116-201ENST00000295549 AGO4Q9HCK5 861 aaKnown RBP25.63■■□□□ 1.69
LINC01116-201ENST00000295549 BRCA2P51587 3418 aa25.63■■□□□ 1.69
LINC01116-201ENST00000295549 WNT7AO00755 349 aa25.63■■□□□ 1.69
LINC01116-201ENST00000295549 KCNA2P16389 499 aa25.63■■□□□ 1.69
LINC01116-201ENST00000295549 UBA1P22314 1058 aaKnown RBP25.63■■□□□ 1.69
LINC01116-201ENST00000295549 MYSM1Q5VVJ2 828 aa25.63■■□□□ 1.69
LINC01116-201ENST00000295549 EMID1Q96A84 441 aaPredicted RBP25.63■■□□□ 1.69
LINC01116-201ENST00000295549 DEFB118Q96PH6 123 aa25.63■■□□□ 1.69
LINC01116-201ENST00000295549 KIAA1217Q5T5P2 1943 aa25.62■■□□□ 1.69
LINC01116-201ENST00000295549 SLC37A4O43826 429 aa25.62■■□□□ 1.69
LINC01116-201ENST00000295549 ATP9AO75110 1047 aa25.62■■□□□ 1.69
LINC01116-201ENST00000295549 BRD1O95696 1058 aa25.62■■□□□ 1.69
LINC01116-201ENST00000295549 ATP2B1P20020 1258 aa25.62■■□□□ 1.69
LINC01116-201ENST00000295549 TTC38Q5R3I4 469 aa25.62■■□□□ 1.69
LINC01116-201ENST00000295549 CELF3Q5SZQ8 465 aaKnown RBP25.62■■□□□ 1.69
LINC01116-201ENST00000295549 ANO1Q5XXA6 986 aa25.62■■□□□ 1.69
LINC01116-201ENST00000295549 LENG1Q96BZ8 264 aaPredicted RBP25.62■■□□□ 1.69
LINC01116-201ENST00000295549 TMEM106CQ9BVX2 250 aa25.62■■□□□ 1.69
LINC01116-201ENST00000295549 IPO5O00410 1097 aaKnown RBP25.61■■□□□ 1.69
LINC01116-201ENST00000295549 MSH4O15457 936 aa25.61■■□□□ 1.69
LINC01116-201ENST00000295549 GH1P01241 217 aa25.61■■□□□ 1.69
LINC01116-201ENST00000295549 GJA9P57773 515 aa25.61■■□□□ 1.69
LINC01116-201ENST00000295549 NKX3-2P78367 333 aa25.61■■□□□ 1.69
LINC01116-201ENST00000295549 GJC2Q5T442 439 aaPredicted RBP25.61■■□□□ 1.69
LINC01116-201ENST00000295549 TLK2Q86UE8 772 aa25.61■■□□□ 1.69
LINC01116-201ENST00000295549 COPS5Q92905 334 aa25.61■■□□□ 1.69
LINC01116-201ENST00000295549 IPO9Q96P70 1041 aaKnown RBP25.61■■□□□ 1.69
LINC01116-201ENST00000295549 ZNF577Q9BSK1 485 aa25.61■■□□□ 1.69
LINC01116-201ENST00000295549 UPF3AQ9H1J1 476 aaKnown RBP25.61■■□□□ 1.69
LINC01116-201ENST00000295549 KCNMB3Q9NPA1 279 aa25.61■■□□□ 1.69
LINC01116-201ENST00000295549 XPNPEP3Q9NQH7 507 aa25.61■■□□□ 1.69
LINC01116-201ENST00000295549 NFASCO94856 1347 aa25.61■■□□□ 1.69
LINC01116-201ENST00000295549 TBX3O15119 743 aa25.6■■□□□ 1.69
LINC01116-201ENST00000295549 DYNC1LI2O43237 492 aaPredicted RBP25.6■■□□□ 1.69
LINC01116-201ENST00000295549 SGPL1O95470 568 aa25.6■■□□□ 1.69
LINC01116-201ENST00000295549 F13A1P00488 732 aa25.6■■□□□ 1.69
LINC01116-201ENST00000295549 CAPN2P17655 700 aa25.6■■□□□ 1.69
LINC01116-201ENST00000295549 ARHGAP1Q07960 439 aa25.6■■□□□ 1.69
LINC01116-201ENST00000295549 LAMC2Q13753 1193 aa25.6■■□□□ 1.69
LINC01116-201ENST00000295549 METTL7BQ6UX53 244 aa25.6■■□□□ 1.69
LINC01116-201ENST00000295549 DHX37Q8IY37 1157 aaKnown RBP25.6■■□□□ 1.69
LINC01116-201ENST00000295549 ETNPPLQ8TBG4 499 aa25.6■■□□□ 1.69
LINC01116-201ENST00000295549 U2AF1L4Q8WU68 220 aaKnown RBP25.6■■□□□ 1.69
LINC01116-201ENST00000295549 ABHD8Q96I13 439 aa25.6■■□□□ 1.69
LINC01116-201ENST00000295549 CRISPLD2Q9H0B8 497 aa25.6■■□□□ 1.69
LINC01116-201ENST00000295549 TBC1D22BQ9NU19 505 aa25.6■■□□□ 1.69
LINC01116-201ENST00000295549 NEMFO60524 1076 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 GGPS1O95749 300 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 PTGS1P23219 599 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 MCM7P33993 719 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 ITGB3BPQ13352 177 aaPredicted RBP25.59■■□□□ 1.69
LINC01116-201ENST00000295549 SLC5A5Q92911 643 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 FAM20AQ96MK3 541 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 AP5M1Q9H0R1 490 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 SPC25Q9HBM1 224 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 OGDHLQ9ULD0 1010 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 ZDHHC9Q9Y397 364 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 PCDHB6Q9Y5E3 794 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 SYNRGQ9UMZ2 1314 aa25.59■■□□□ 1.69
LINC01116-201ENST00000295549 POTEFA5A3E0 1075 aa25.58■■□□□ 1.69
LINC01116-201ENST00000295549 DHX15O43143 795 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms