RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 SSBP05455 408 aaKnown RBP eCLIP18.7■□□□□ 0.58
HIF3A-203ENST00000291300 HSD17B4P51659 736 aa18.7■□□□□ 0.58
HIF3A-203ENST00000291300 TTI2Q6NXR4 508 aa18.7■□□□□ 0.58
HIF3A-203ENST00000291300 CREBRFQ8IUR6 639 aa18.7■□□□□ 0.58
HIF3A-203ENST00000291300 ZNF280CQ8ND82 737 aa18.7■□□□□ 0.58
HIF3A-203ENST00000291300 ATG4CQ96DT6 458 aa18.7■□□□□ 0.58
HIF3A-203ENST00000291300 PURBQ96QR8 312 aaKnown RBP18.7■□□□□ 0.58
HIF3A-203ENST00000291300 GINM1Q9NU53 330 aa18.7■□□□□ 0.58
HIF3A-203ENST00000291300 COL11A1P12107 1806 aaPredicted RBP18.69■□□□□ 0.58
HIF3A-203ENST00000291300 ARP10275 920 aa18.69■□□□□ 0.58
HIF3A-203ENST00000291300 IDEP14735 1019 aa18.69■□□□□ 0.58
HIF3A-203ENST00000291300 CYP4A11Q02928 519 aa18.69■□□□□ 0.58
HIF3A-203ENST00000291300 ANKRD40Q6AI12 368 aa18.69■□□□□ 0.58
HIF3A-203ENST00000291300 UNC13DQ70J99 1090 aa18.69■□□□□ 0.58
HIF3A-203ENST00000291300 FAM20AQ96MK3 541 aa18.69■□□□□ 0.58
HIF3A-203ENST00000291300 FGFBP2Q9BYJ0 223 aa18.69■□□□□ 0.58
HIF3A-203ENST00000291300 PICK1Q9NRD5 415 aa18.69■□□□□ 0.58
HIF3A-203ENST00000291300 TAB2Q9NYJ8 693 aa18.69■□□□□ 0.58
HIF3A-203ENST00000291300 RIPK3Q9Y572 518 aa18.69■□□□□ 0.58
HIF3A-203ENST00000291300 ADM5C9JUS6 153 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 RAD51AP2Q09MP3 1159 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 TRAF1Q13077 416 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 TCP11X2Q5H9J9 407 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 CEP135Q66GS9 1140 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 VPS16Q9H269 839 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 SEMA6BQ9H3T3 888 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 RGL1Q9NZL6 768 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 RBBP6Q7Z6E9 1792 aaKnown RBP18.68■□□□□ 0.58
HIF3A-203ENST00000291300 KCNJ18B7U540 433 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 PLA2G4BP0C869 781 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 SFPQP23246 707 aaKnown RBP eCLIP18.68■□□□□ 0.58
HIF3A-203ENST00000291300 EHHADHQ08426 723 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 KCNJ12Q14500 433 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 LRRC41Q15345 812 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 CCDC150Q8NCX0 1101 aa18.68■□□□□ 0.58
HIF3A-203ENST00000291300 SRRTQ9BXP5 876 aaKnown RBP18.68■□□□□ 0.58
HIF3A-203ENST00000291300 LIMA1Q9UHB6 759 aaKnown RBP18.68■□□□□ 0.58
HIF3A-203ENST00000291300 R3HCC1Q9Y3T6 440 aaKnown RBP18.68■□□□□ 0.58
HIF3A-203ENST00000291300 USP2O75604 605 aaPredicted RBP18.67■□□□□ 0.58
HIF3A-203ENST00000291300 PBX1P40424 430 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 ADKP55263 362 aaKnown RBP18.67■□□□□ 0.58
HIF3A-203ENST00000291300 ARSHQ5FYA8 562 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 SPECC1LQ69YQ0 1117 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.67■□□□□ 0.58
HIF3A-203ENST00000291300 CNKSR2Q8WXI2 1034 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 KDM3AQ9Y4C1 1321 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 VWA5AO00534 786 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 PSMA7O14818 248 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 CHMP2AO43633 222 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 ITGB5P18084 799 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 P2RX5Q93086 422 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 TRIM47Q96LD4 638 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 NT5C3AQ9H0P0 336 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 BCAS3Q9H6U6 928 aa18.67■□□□□ 0.58
HIF3A-203ENST00000291300 PVALEFA0A1B0GWK0 134 aa18.66■□□□□ 0.58
HIF3A-203ENST00000291300 PSMD10O75832 226 aa18.66■□□□□ 0.58
HIF3A-203ENST00000291300 CYP11B2P19099 503 aa18.66■□□□□ 0.58
HIF3A-203ENST00000291300 COPB1P53618 953 aaKnown RBP18.66■□□□□ 0.58
HIF3A-203ENST00000291300 USP14P54578 494 aa18.66■□□□□ 0.58
HIF3A-203ENST00000291300 SLC12A3P55017 1021 aa18.66■□□□□ 0.58
HIF3A-203ENST00000291300 PABPC4Q13310 644 aaKnown RBP eCLIP18.66■□□□□ 0.58
HIF3A-203ENST00000291300 CEP55Q53EZ4 464 aa18.66■□□□□ 0.58
HIF3A-203ENST00000291300 C9orf131Q5VYM1 1079 aa18.66■□□□□ 0.58
HIF3A-203ENST00000291300 CNNM4Q6P4Q7 775 aa18.66■□□□□ 0.58
HIF3A-203ENST00000291300 OTOP1Q7RTM1 612 aa18.66■□□□□ 0.58
HIF3A-203ENST00000291300 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.66■□□□□ 0.58
HIF3A-203ENST00000291300 DHTKD1Q96HY7 919 aaPredicted RBP18.66■□□□□ 0.58
HIF3A-203ENST00000291300 POLD4Q9HCU8 107 aa18.66■□□□□ 0.58
HIF3A-203ENST00000291300 TRMT1Q9NXH9 659 aaKnown RBP18.66■□□□□ 0.58
HIF3A-203ENST00000291300 TBC1D7Q9P0N9 293 aa18.66■□□□□ 0.58
HIF3A-203ENST00000291300 RPTORQ8N122 1335 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 LRRC10BA6NIK2 292 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 ZBTB39O15060 712 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 CCNE1P24864 410 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 RPA1P27694 616 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 COASYQ13057 564 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.65■□□□□ 0.58
HIF3A-203ENST00000291300 GPBP1Q86WP2 473 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 TMEM139Q8IV31 216 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 TC2NQ8N9U0 490 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 SYTL5Q8TDW5 730 aaPredicted RBP18.65■□□□□ 0.58
HIF3A-203ENST00000291300 SLC5A5Q92911 643 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 TAAR1Q96RJ0 339 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 EIF2AK1Q9BQI3 630 aaKnown RBP18.65■□□□□ 0.58
HIF3A-203ENST00000291300 STIM1Q13586 685 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 CTTNQ14247 550 aaKnown RBP18.65■□□□□ 0.58
HIF3A-203ENST00000291300 DNTTIP2Q5QJE6 756 aaKnown RBP18.65■□□□□ 0.58
HIF3A-203ENST00000291300 LRCH2Q5VUJ6 765 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 REPS2Q8NFH8 660 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 CCDC47Q96A33 483 aaKnown RBP18.65■□□□□ 0.58
HIF3A-203ENST00000291300 TMX1Q9H3N1 280 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 AS3MTQ9HBK9 375 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 PKD2L1Q9P0L9 805 aa18.65■□□□□ 0.58
HIF3A-203ENST00000291300 PEX10O60683 326 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 RPS6P62753 249 aaKnown RBP18.64■□□□□ 0.57
HIF3A-203ENST00000291300 SEMA3FQ13275 785 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 E4F1Q66K89 784 aaPredicted RBP18.64■□□□□ 0.57
HIF3A-203ENST00000291300 C16orf45Q96MC5 204 aaPredicted RBP18.64■□□□□ 0.57
HIF3A-203ENST00000291300 WDR11Q9BZH6 1224 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 ADARB2Q9NS39 739 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms