RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 MFAP3LO75121 409 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 IFNB1P01574 187 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 ATF7P17544 494 aaPredicted RBP5.25□□□□□ -1.57
UBR1-201ENST00000290650 TMOD1P28289 359 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 ASPRV1Q53RT3 343 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 ZNF746Q6NUN9 644 aaPredicted RBP5.25□□□□□ -1.57
UBR1-201ENST00000290650 MS4A14Q96JA4 679 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 APOL6Q9BWW8 343 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 RAVER2Q9HCJ3 691 aaKnown RBP5.25□□□□□ -1.57
UBR1-201ENST00000290650 EPB41L5Q9HCM4 733 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 AGPAT5Q9NUQ2 364 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 C3P01024 1663 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.25□□□□□ -1.57
UBR1-201ENST00000290650 TTC26A0AVF1 554 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 SMAD1Q15797 465 aaKnown RBP5.25□□□□□ -1.57
UBR1-201ENST00000290650 TSGA10IPQ3SY00 556 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 ANKRD35Q8N283 1001 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 OTUD6BQ8N6M0 293 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 ABCB6Q9NP58 842 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 EMILIN3Q9NT22 766 aa5.25□□□□□ -1.57
UBR1-201ENST00000290650 TFRCP02786 760 aaKnown RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 SLCO1A2P46721 670 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 CCZ1BP86790 482 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 CCZ1P86791 482 aaPredicted RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 TRPC3Q13507 836 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 SRGAP1Q7Z6B7 1085 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 ANKRD7Q92527 254 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 GOLPH3Q9H4A6 298 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 PCDHA13Q9Y5I0 950 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 IKBKGQ9Y6K9 419 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 SPATA31A1Q5TZJ5 1347 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 PSDA5PKW4 1024 aaPredicted RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 ACTN4O43707 911 aaKnown RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 BBOX1O75936 387 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 TOB1P50616 345 aaPredicted RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 IFRD2Q12894 506 aaPredicted RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 TERF2Q15554 542 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 ZNF394Q53GI3 561 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 ANKRD40Q6AI12 368 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 NFRKBQ6P4R8 1299 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 PASD1Q8IV76 773 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 IFT20Q8IY31 132 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 SLC4A9Q96Q91 983 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 FAM204AQ9H8W3 233 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 KDM3AQ9Y4C1 1321 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 PIK3C2AO00443 1686 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 PNMA6FA0A0J9YX94 578 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 EBAG9O00559 213 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 DESP17661 470 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 KIF11P52732 1056 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 VWA3BQ502W6 1294 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 PRR5LQ6MZQ0 368 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 SCARA5Q6ZMJ2 495 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 GBP6Q6ZN66 633 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 ILDR1Q86SU0 546 aaPredicted RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 LRRN4CLQ8ND94 238 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 ANO3Q9BYT9 981 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 NDST4Q9H3R1 872 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 UBE2TQ9NPD8 197 aaPredicted RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 PI4KBQ9UBF8 816 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 CDC23Q9UJX2 597 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 CACNA1FO60840 1977 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 LRRC53A6NM62 1247 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 CD44P16070 742 aaKnown RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 NF2P35240 595 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 FXR1P51114 621 aaKnown RBP eCLIP5.24□□□□□ -1.57
UBR1-201ENST00000290650 KRT71Q3SY84 523 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 MTERF2Q49AM1 385 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 HP1BP3Q5SSJ5 553 aaPredicted RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 DCUN1D2Q6PH85 259 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 CLEC4GQ6UXB4 293 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 NLGN1Q8N2Q7 840 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 PPP1R14CQ8TAE6 165 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 HAUS1Q96CS2 278 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 KCNQ5Q9NR82 932 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 TRPC6Q9Y210 931 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 TBC1D8O95759 1140 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 PNMA6AP0CW24 399 aaPredicted RBP5.24□□□□□ -1.57
UBR1-201ENST00000290650 ZSCAN26Q16670 478 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 SFR1Q86XK3 245 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 SLFN12Q8IYM2 578 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 RNF169Q8NCN4 708 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 CHURC1Q8WUH1 139 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 TEKT3Q9BXF9 490 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 SH2D4AQ9H788 454 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 COL4A3BPQ9Y5P4 624 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 FLT1P17948 1338 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 MYH2Q9UKX2 1941 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 ACTN1P12814 892 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 CD58P19256 250 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 ACTN2P35609 894 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 LIG4P49917 911 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 MYL7Q01449 175 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 C12orf60Q5U649 245 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 CYFIP1Q7L576 1253 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 TRIM58Q8NG06 486 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 CCDC26Q8TAB7 109 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 BARHL2Q9NY43 387 aa5.24□□□□□ -1.57
UBR1-201ENST00000290650 MON2Q7Z3U7 1717 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms