RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 ADCK5Q3MIX3 580 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 GDF6Q6KF10 455 aaPredicted RBP12.07□□□□□ -0.48
SNF8-201ENST00000290330 USP17L6PQ6QN14 398 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 DHX32Q7L7V1 743 aaKnown RBP12.07□□□□□ -0.48
SNF8-201ENST00000290330 MICU3Q86XE3 530 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 SMARCC2Q8TAQ2 1214 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 GPKOWQ92917 476 aaPredicted RBP eCLIP12.07□□□□□ -0.48
SNF8-201ENST00000290330 SPATA33Q96N06 139 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 INPP4AQ96PE3 977 aaPredicted RBP12.07□□□□□ -0.48
SNF8-201ENST00000290330 PBX4Q9BYU1 374 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 MTIF3Q9H2K0 278 aaKnown RBP12.07□□□□□ -0.48
SNF8-201ENST00000290330 NOD1Q9Y239 953 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 KIAA1217Q5T5P2 1943 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 COL6A3P12111 3177 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 HAS3O00219 553 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 SORBS3O60504 671 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 STAM2O75886 525 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 IQCF3P0C7M6 154 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 ZNF286BP0CG31 522 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 ICAM3P32942 547 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 PSEN2P49810 448 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 BFSP2Q13515 415 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 KIAA0753Q2KHM9 967 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 GNPTABQ3T906 1256 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 APOA5Q6Q788 366 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 SYNE3Q6ZMZ3 975 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 TMTC3Q6ZXV5 915 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 CCDC82Q8N4S0 544 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 RETREG2Q8NC44 543 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 MYLIPQ8WY64 445 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 CUL5Q93034 780 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 TIFAQ96CG3 184 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 TCEANC2Q96MN5 208 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 ALG1Q9BT22 464 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 KATNAL1Q9BW62 490 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 ZNF576Q9H609 170 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 BCAS3Q9H6U6 928 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 PSTPIP2Q9H939 334 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 MLXIPQ9HAP2 919 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 RTEL1Q9NZ71 1219 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 HDAC6Q9UBN7 1215 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 GTF2IRD1Q9UHL9 959 aa12.06□□□□□ -0.48
SNF8-201ENST00000290330 LAMA2P24043 3122 aaKnown RBP12.05□□□□□ -0.48
SNF8-201ENST00000290330 hCG_1642624A0A1W2PR95 340 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 SPATA31C2B4DYI2 1134 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 RFC2P35250 354 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 SEMA3FQ13275 785 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 KRT32Q14532 448 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 MFSD10Q14728 455 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 GRIN2CQ14957 1233 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 PCNX4Q63HM2 1172 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 DEFB128Q7Z7B8 93 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 C7orf31Q8N865 590 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 C16orf70Q9BSU1 422 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 BRPF3Q9ULD4 1205 aa12.05□□□□□ -0.48
SNF8-201ENST00000290330 FIBPO43427 364 aa12.04□□□□□ -0.48
SNF8-201ENST00000290330 HMGB1P09429 215 aaKnown RBP12.04□□□□□ -0.48
SNF8-201ENST00000290330 RBL2Q08999 1139 aa12.04□□□□□ -0.48
SNF8-201ENST00000290330 NEDD9Q14511 834 aa12.04□□□□□ -0.48
SNF8-201ENST00000290330 RAB30Q15771 203 aa12.04□□□□□ -0.48
SNF8-201ENST00000290330 XRRA1Q6P2D8 792 aa12.04□□□□□ -0.48
SNF8-201ENST00000290330 CAGE1Q8TC20 777 aa12.04□□□□□ -0.48
SNF8-201ENST00000290330 AFAP1L1Q8TED9 768 aa12.04□□□□□ -0.48
SNF8-201ENST00000290330 DHX38Q92620 1227 aaKnown RBP12.04□□□□□ -0.48
SNF8-201ENST00000290330 KCNB2Q92953 911 aa12.04□□□□□ -0.48
SNF8-201ENST00000290330 RBM28Q9NW13 759 aaKnown RBP12.04□□□□□ -0.48
SNF8-201ENST00000290330 SLC4A7Q9Y6M7 1214 aa12.04□□□□□ -0.48
SNF8-201ENST00000290330 ZBBXA8MT70 800 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 ZBTB43O43298 467 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 ACTN1P12814 892 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 FOSL2P15408 326 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 HSPA4P34932 840 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 FUT2Q10981 343 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 HIC1Q14526 733 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 GPNMBQ14956 572 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 RTN1Q16799 776 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 METTL7BQ6UX53 244 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 CYFIP1Q7L576 1253 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 HEATR3Q7Z4Q2 680 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 CCDC155Q8N6L0 562 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 MAFAQ8NHW3 353 aaPredicted RBP12.03□□□□□ -0.48
SNF8-201ENST00000290330 SENP7Q9BQF6 1050 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 MSRAQ9UJ68 235 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 YBX2Q9Y2T7 364 aaKnown RBP12.03□□□□□ -0.48
SNF8-201ENST00000290330 CDH23Q9H251 3354 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 CNTNAP5Q8WYK1 1306 aa12.03□□□□□ -0.48
SNF8-201ENST00000290330 KLF18A0A0U1RQI7 1052 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 H3BRB1 525 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 NOP56O00567 594 aaKnown RBP12.02□□□□□ -0.49
SNF8-201ENST00000290330 LGALS2P05162 132 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 CKBP12277 381 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 CPA1P15085 419 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 SELPP16109 830 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 ATP2A2P16615 1042 aaKnown RBP12.02□□□□□ -0.49
SNF8-201ENST00000290330 ITGB5P18084 799 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 RABGGTBP53611 331 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 ZNF200P98182 395 aaPredicted RBP12.02□□□□□ -0.49
SNF8-201ENST00000290330 PTK7Q13308 1070 aa12.02□□□□□ -0.49
SNF8-201ENST00000290330 UBE2SQ16763 222 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms