RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 PSMC2P35998 433 aaKnown RBP16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 SLC12A2P55011 1212 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 MTF1Q14872 753 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 HADHQ16836 314 aaKnown RBP16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 GPR108Q9NPR9 543 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 BZW2Q9Y6E2 419 aaKnown RBP16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 ACSL3O95573 720 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 NDST4Q9H3R1 872 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 SMYD2Q9NRG4 433 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 TAF12Q16514 161 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 ZMYND12Q9H0C1 365 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 MAGEF1Q9HAY2 307 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 MORC2Q9Y6X9 1032 aaPredicted RBP16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 YARSP54577 528 aaKnown RBP16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 MMS22LQ6ZRQ5 1243 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 ESYT3A0FGR9 886 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 GIPC1O14908 333 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 POLR1AO95602 1720 aaPredicted RBP16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 TRAPPC10P48553 1259 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 DMP1Q13316 513 aaPredicted RBP16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 KIF22Q14807 665 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 DCLK2Q8N568 766 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 KIF28PB7ZC32 967 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 LAD1O00515 517 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 PDE6BP35913 854 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 NFRKBQ6P4R8 1299 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 CUEDC2Q9H467 287 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 KIAA0825Q8IV33 1275 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 DPF2Q92785 391 aa16.65■□□□□ 0.26
SHROOM4-201ENST00000289292 INHBAP08476 426 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 IFNAR1P17181 557 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 ACTN3Q08043 901 aaPredicted RBP16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 SLFN13Q68D06 897 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 PBKQ96KB5 322 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 TSPYL2Q9H2G4 693 aaPredicted RBP16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 PRPF3O43395 683 aaKnown RBP16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 CCNE1P24864 410 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 MFAP3P55082 362 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 TEKT1Q969V4 418 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 FMO2Q99518 471 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 CARD10Q9BWT7 1032 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 BEND6Q5SZJ8 279 aaPredicted RBP16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 MORC4Q8TE76 937 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 HAUS1Q96CS2 278 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 WDR24Q96S15 920 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 IFT122Q9HBG6 1241 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 SFI1A8K8P3 1242 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 ADAMTS1Q9UHI8 967 aa16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 PACSIN2Q9UNF0 486 aaPredicted RBP16.64■□□□□ 0.25
SHROOM4-201ENST00000289292 ICA1Q05084 483 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 TRIM50Q86XT4 487 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 MCAMP43121 646 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 CFAP36Q96G28 342 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 MED10Q9BTT4 135 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 MLXIPLQ9NP71 852 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 DISC1Q9NRI5 854 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 KCNV2Q8TDN2 545 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 GLG1Q92896 1179 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 AK8Q96MA6 479 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 LRRIQ4A6NIV6 560 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 MYO1FO00160 1098 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 RASGRF2O14827 1237 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 PRCPP42785 496 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 NME8Q8N427 588 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 MARCH10Q8NA82 808 aaPredicted RBP16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 WHAMMQ8TF30 809 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 MRFAP1Q9Y605 127 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 ZNF804BA4D1E1 1349 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 PLS3P13797 630 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 IFRD2Q12894 506 aaPredicted RBP16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 EMILIN3Q9NT22 766 aa16.63■□□□□ 0.25
SHROOM4-201ENST00000289292 RPS6KA2Q15349 733 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 PDCD7Q8N8D1 485 aaKnown RBP16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 FGGP02679 453 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 RUNDC3BQ96NL0 473 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 ANO3Q9BYT9 981 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 KRT1P04264 644 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 CDC27P30260 824 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 BBOF1Q8ND07 529 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 ACTR5Q9H9F9 607 aaPredicted RBP16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 SHROOM2Q13796 1616 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 UBAP1LF5GYI3 381 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 FKBP3Q00688 224 aaKnown RBP16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 OSBPL5Q9H0X9 879 aaPredicted RBP16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 SUGCTQ9HAC7 445 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 FIS1Q9Y3D6 152 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 CDK12Q9NYV4 1490 aaPredicted RBP16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 LOC102724159A0A0B4J2E5 919 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 HMGB1P1B2RPK0 211 aaPredicted RBP16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 SART1O43290 800 aaKnown RBP16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 MMEP08473 750 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 TMED1Q13445 227 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 PWP2Q15269 919 aaKnown RBP16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 ERFEQ4G0M1 354 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 SESTD1Q86VW0 696 aa16.62■□□□□ 0.25
SHROOM4-201ENST00000289292 NEK9Q8TD19 979 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms