RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 KRT78Q8N1N4 520 aa4.75□□□□□ -1.65
NCOA1-201ENST00000288599 C12orf50Q8NA57 414 aaPredicted RBP4.75□□□□□ -1.65
NCOA1-201ENST00000288599 ATG16L2Q8NAA4 619 aa4.75□□□□□ -1.65
NCOA1-201ENST00000288599 RNF139Q8WU17 664 aa4.75□□□□□ -1.65
NCOA1-201ENST00000288599 PNMA5Q96PV4 448 aa4.75□□□□□ -1.65
NCOA1-201ENST00000288599 STX8Q9UNK0 236 aa4.75□□□□□ -1.65
NCOA1-201ENST00000288599 ZFYVE9O95405 1425 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 ZSCAN9O15535 394 aaPredicted RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 KRT8P05787 483 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 MYL3P08590 195 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 SLC9A1P19634 815 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 YY1P25490 414 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 NTSP30990 170 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 CLCA4Q14CN2 919 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 UVSSAQ2YD98 709 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 ANKRD20A8PQ5CZ79 823 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 POTEEQ6S8J3 1075 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 THEM5Q8N1Q8 247 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 NKD1Q969G9 470 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 CLCC1Q96S66 551 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 HPCAL4Q9UM19 191 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 PCDHB8Q9UN66 801 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 PPIEQ9UNP9 301 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 KDM5AP29375 1690 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 MSH6P52701 1360 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 IQANK1A0A1B0GTG1 560 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 ZNF839A8K0R7 811 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 PRPF4O43172 522 aaKnown RBP eCLIP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 LACTBP83111 547 aaPredicted RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 ITPRIPL1Q6GPH6 555 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 KRT80Q6KB66 452 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 MIER3Q7Z3K6 550 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 GPIHBP1Q8IV16 184 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 ABHD5Q8WTS1 349 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 LRRC37BQ96QE4 947 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 PLEKHA4Q9H4M7 779 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 GPN3Q9UHW5 284 aaPredicted RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 MAGED1Q9Y5V3 778 aaPredicted RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 ZC3H4Q9UPT8 1303 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 BTBD11A6QL63 1104 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 CLUP10909 449 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 HLA-DPA1P20036 260 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 GTF2E2P29084 291 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 PPP2R1AP30153 589 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 UBA7P41226 1012 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 GNAQP50148 359 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 DHX9Q08211 1270 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 TWF1Q12792 350 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 MKRN3Q13064 507 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 C6orf118Q5T5N4 469 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 PLEKHM3Q6ZWE6 761 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 CNNM3Q8NE01 707 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 ACSBG1Q96GR2 724 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 PPP1R13BQ96KQ4 1090 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 MIS12Q9H081 205 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 PCDHB11Q9Y5F2 797 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 GSTA4O15217 222 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 OPHN1O60890 802 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 WBP4O75554 376 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 DDHD2O94830 711 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 F13A1P00488 732 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 YWHAQP27348 245 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 COPB2P35606 906 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 SESN3P58005 492 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 CCT2P78371 535 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 TAF1BQ53T94 588 aaPredicted RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 INTS8Q75QN2 995 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 GPR161Q8N6U8 529 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 WNK4Q96J92 1243 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 HESX1Q9UBX0 185 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 SCOCQ9UIL1 159 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 KCNH3Q9ULD8 1083 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 MRFAP1Q9Y605 127 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 YEATS2Q9ULM3 1422 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 DENND3A2RUS2 1198 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 PPIP5K2O43314 1243 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 PFDN1O60925 122 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 KRT2P35908 639 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 KARSQ15046 597 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 WLSQ5T9L3 541 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 PRR23CQ6ZRP0 262 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 UNC45BQ8IWX7 931 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 SCUBE3Q8IX30 993 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 MRFAP1L1Q96HT8 127 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 DRC3Q9H069 523 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 SARS2Q9NP81 518 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 WDR35Q9P2L0 1181 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 NOB1Q9ULX3 412 aaKnown RBP4.74□□□□□ -1.65
NCOA1-201ENST00000288599 NFU1Q9UMS0 254 aa4.74□□□□□ -1.65
NCOA1-201ENST00000288599 TRIM64BA6NI03 449 aa4.73□□□□□ -1.65
NCOA1-201ENST00000288599 TECP42680 631 aa4.73□□□□□ -1.65
NCOA1-201ENST00000288599 NCAPHQ15003 741 aa4.73□□□□□ -1.65
NCOA1-201ENST00000288599 CDC37Q16543 378 aaPredicted RBP4.73□□□□□ -1.65
NCOA1-201ENST00000288599 THEMIS2Q5TEJ8 643 aa4.73□□□□□ -1.65
NCOA1-201ENST00000288599 FOXR2Q6PJQ5 311 aa4.73□□□□□ -1.65
NCOA1-201ENST00000288599 LMNTD2Q8IXW0 634 aa4.73□□□□□ -1.65
NCOA1-201ENST00000288599 SYTL1Q8IYJ3 562 aa4.73□□□□□ -1.65
NCOA1-201ENST00000288599 PRRG4Q9BZD6 226 aa4.73□□□□□ -1.65
NCOA1-201ENST00000288599 RAB17Q9H0T7 212 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms