RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 MFSD14BQ5SR56 506 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 PEX26Q7Z412 305 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 ATP8A2Q9NTI2 1148 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 PPP1R2P41236 205 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 ITPK1Q13572 414 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 LLGL1Q15334 1064 aa14.73□□□□□ -0.05
SCAF4-201ENST00000286835 DDX42Q86XP3 938 aaKnown RBP eCLIP14.73□□□□□ -0.05
SCAF4-201ENST00000286835 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.73□□□□□ -0.058e-7■■■■■ 56.9
SCAF4-201ENST00000286835 UBE4AQ14139 1066 aa14.72□□□□□ -0.05
SCAF4-201ENST00000286835 FAM84BQ96KN1 310 aaPredicted RBP14.72□□□□□ -0.05
SCAF4-201ENST00000286835 RNPC3Q96LT9 517 aaKnown RBP14.72□□□□□ -0.05
SCAF4-201ENST00000286835 MTA3Q9BTC8 594 aa14.72□□□□□ -0.05
SCAF4-201ENST00000286835 EPHB6O15197 1021 aa14.72□□□□□ -0.05
SCAF4-201ENST00000286835 ZNF76P36508 570 aa14.72□□□□□ -0.05
SCAF4-201ENST00000286835 KCNB1Q14721 858 aa14.72□□□□□ -0.05
SCAF4-201ENST00000286835 FAM26FQ5R3K3 315 aa14.72□□□□□ -0.05
SCAF4-201ENST00000286835 DDX12PQ92771 950 aa14.72□□□□□ -0.05
SCAF4-201ENST00000286835 DUSP9Q99956 384 aaKnown RBP14.72□□□□□ -0.05
SCAF4-201ENST00000286835 DCCP43146 1447 aa14.72□□□□□ -0.05
SCAF4-201ENST00000286835 BAG6P46379 1132 aa14.72□□□□□ -0.05
SCAF4-201ENST00000286835 PNMA8AQ86V59 439 aaPredicted RBP14.72□□□□□ -0.05
SCAF4-201ENST00000286835 PANK4Q9NVE7 773 aa14.72□□□□□ -0.05
SCAF4-201ENST00000286835 MYH8P13535 1937 aa14.72□□□□□ -0.05
SCAF4-201ENST00000286835 HNRNPH1P31943 449 aaKnown RBP14.71□□□□□ -0.05
SCAF4-201ENST00000286835 GBP2P32456 591 aaPredicted RBP14.71□□□□□ -0.05
SCAF4-201ENST00000286835 ZFYVE27Q5T4F4 411 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 CREG2Q8IUH2 290 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 WDR66Q8TBY9 1149 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 RIOK1Q9BRS2 568 aaKnown RBP14.71□□□□□ -0.05
SCAF4-201ENST00000286835 NOVA2Q9UNW9 492 aaKnown RBP14.71□□□□□ -0.05
SCAF4-201ENST00000286835 ZNF804BA4D1E1 1349 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 LAMA4Q16363 1823 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 FAM153BP0C7A2 387 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 POLD1P28340 1107 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 VPS72Q15906 364 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 FAM153CQ494X1 144 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 CCDC65Q8IXS2 484 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 DDX47Q9H0S4 455 aaKnown RBP14.71□□□□□ -0.05
SCAF4-201ENST00000286835 FAM153AQ9UHL3 310 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 BAIAP2L1Q9UHR4 511 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 TSKSQ9UJT2 592 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 MINPP1Q9UNW1 487 aa14.71□□□□□ -0.05
SCAF4-201ENST00000286835 CETN3O15182 167 aa14.71□□□□□ -0.06
SCAF4-201ENST00000286835 GLI1P08151 1106 aa14.71□□□□□ -0.06
SCAF4-201ENST00000286835 VIMP08670 466 aaKnown RBP14.71□□□□□ -0.06
SCAF4-201ENST00000286835 TCP10Q12799 353 aa14.71□□□□□ -0.06
SCAF4-201ENST00000286835 ADAM9Q13443 819 aa14.71□□□□□ -0.06
SCAF4-201ENST00000286835 UBE2SQ16763 222 aa14.71□□□□□ -0.06
SCAF4-201ENST00000286835 NLGN1Q8N2Q7 840 aa14.71□□□□□ -0.06
SCAF4-201ENST00000286835 LRRC45Q96CN5 670 aa14.71□□□□□ -0.06
SCAF4-201ENST00000286835 TMEM47Q9BQJ4 181 aa14.71□□□□□ -0.06
SCAF4-201ENST00000286835 PCDHB13Q9Y5F0 798 aa14.71□□□□□ -0.06
SCAF4-201ENST00000286835 AARSP49588 968 aaKnown RBP eCLIP14.7□□□□□ -0.06
SCAF4-201ENST00000286835 PLS1Q14651 629 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 IFI16Q16666 785 aaKnown RBP14.7□□□□□ -0.06
SCAF4-201ENST00000286835 NAALADL2Q58DX5 795 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 FAM83BQ5T0W9 1011 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 U2AF1L4Q8WU68 220 aaKnown RBP14.7□□□□□ -0.06
SCAF4-201ENST00000286835 MTMR8Q96EF0 704 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 LRRC27Q9C0I9 530 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 SPATA31A5Q5VU36 1347 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 SPATA31A7Q8IWB4 1347 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 GUCY2CP25092 1073 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 ADCY7P51828 1080 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 MAP2K1Q02750 393 aaPredicted RBP14.7□□□□□ -0.06
SCAF4-201ENST00000286835 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
SCAF4-201ENST00000286835 SH3RF3Q8TEJ3 882 aaPredicted RBP14.7□□□□□ -0.06
SCAF4-201ENST00000286835 TBC1D31Q96DN5 1066 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 KIAA1024Q9UPX6 916 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 ATP8A1Q9Y2Q0 1164 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 LMO7Q8WWI1 1683 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 TDP2O95551 362 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 LSP1P33241 339 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 FKBP3Q00688 224 aaKnown RBP14.7□□□□□ -0.06
SCAF4-201ENST00000286835 HAUS3Q68CZ6 603 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 GPBP1Q86WP2 473 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 ZNF34Q8IZ26 560 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 NSUN4Q96CB9 384 aaKnown RBP14.7□□□□□ -0.06
SCAF4-201ENST00000286835 PLAGL2Q9UPG8 496 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 COL4A3BPQ9Y5P4 624 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 MYMKA6NI61 221 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 PRPF6O94906 941 aaKnown RBP14.7□□□□□ -0.06
SCAF4-201ENST00000286835 TMOD1P28289 359 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 KSR1Q8IVT5 923 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 JDP2Q8WYK2 163 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 AK8Q96MA6 479 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 CCSER1Q9C0I3 900 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 CUEDC2Q9H467 287 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 NARFQ9UHQ1 456 aa14.7□□□□□ -0.06
SCAF4-201ENST00000286835 MYL1P05976 194 aa14.69□□□□□ -0.06
SCAF4-201ENST00000286835 RPSAP08865 295 aaKnown RBP14.69□□□□□ -0.06
SCAF4-201ENST00000286835 MMP10P09238 476 aa14.69□□□□□ -0.06
SCAF4-201ENST00000286835 KLRC1P26715 233 aa14.69□□□□□ -0.06
SCAF4-201ENST00000286835 SCNN1DP51172 638 aa14.69□□□□□ -0.06
SCAF4-201ENST00000286835 FUT2Q10981 343 aa14.69□□□□□ -0.06
SCAF4-201ENST00000286835 CLEC4GQ6UXB4 293 aa14.69□□□□□ -0.06
SCAF4-201ENST00000286835 MMGT1Q8N4V1 131 aa14.69□□□□□ -0.06
SCAF4-201ENST00000286835 ZNF507Q8TCN5 953 aa14.69□□□□□ -0.06
SCAF4-201ENST00000286835 SEMA6BQ9H3T3 888 aa14.69□□□□□ -0.06
SCAF4-201ENST00000286835 PCDHA12Q9UN75 941 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms