RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 SRRM1Q8IYB3 904 aaKnown RBP17.1■□□□□ 0.33
MSI2-201ENST00000284073 OSBPL5Q9H0X9 879 aaPredicted RBP17.1■□□□□ 0.33
MSI2-201ENST00000284073 TMEM60Q9H2L4 133 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 WARS2Q9UGM6 360 aaKnown RBP17.1■□□□□ 0.33
MSI2-201ENST00000284073 SPARCL1Q14515 664 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 TAF12Q16514 161 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 C10orf76Q5T2E6 689 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 CPXCR1Q8N123 301 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 TRPC6Q9Y210 931 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 N4BP1O75113 896 aaKnown RBP17.1■□□□□ 0.33
MSI2-201ENST00000284073 USP14P54578 494 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 SH2D3CQ8N5H7 860 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 VTI1AQ96AJ9 217 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 ATP6V1G3Q96LB4 118 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 LRRC37BQ96QE4 947 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 PCDHB6Q9Y5E3 794 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 PDE8AO60658 829 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 HOXB7P09629 217 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 ARMCX5Q6P1M9 558 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
MSI2-201ENST00000284073 COG1Q8WTW3 980 aa17.1■□□□□ 0.33
MSI2-201ENST00000284073 KAT6BQ8WYB5 2073 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 SLC12A1Q13621 1099 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 BBS9Q3SYG4 887 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 GLE1Q53GS7 698 aaKnown RBP17.09■□□□□ 0.33
MSI2-201ENST00000284073 LARP4BQ92615 738 aaKnown RBP17.09■□□□□ 0.33
MSI2-201ENST00000284073 CFAP36Q96G28 342 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 TRIM55Q9BYV6 548 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 FGFR1OP2Q9NVK5 253 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 GPATCH8Q9UKJ3 1502 aaKnown RBP17.09■□□□□ 0.33
MSI2-201ENST00000284073 RASA4BC9J798 803 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 CLIC2O15247 247 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 RASA4O43374 803 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 MAN1A2O60476 641 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 FAM161BQ96MY7 647 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 SERPINI1Q99574 410 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 CPP00450 1065 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 PDE6AP16499 860 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 EPHB1P54762 984 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 PNMA1Q8ND90 353 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 CHMP6Q96FZ7 201 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 CAPN11Q9UMQ6 739 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 ORC6Q9Y5N6 252 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 RIN2Q8WYP3 895 aaPredicted RBP17.09■□□□□ 0.33
MSI2-201ENST00000284073 MED23Q9ULK4 1368 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 CASP1P29466 404 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 NSMCE1Q8WV22 266 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 CEP19Q96LK0 163 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 EIF2AQ9BY44 585 aaKnown RBP17.09■□□□□ 0.33
MSI2-201ENST00000284073 NYXQ9GZU5 481 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 GJB4Q9NTQ9 266 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 GINM1Q9NU53 330 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 COL4A3BPQ9Y5P4 624 aa17.09■□□□□ 0.33
MSI2-201ENST00000284073 ATP5HO75947 161 aa17.08■□□□□ 0.33
MSI2-201ENST00000284073 FMNL1O95466 1100 aaPredicted RBP17.08■□□□□ 0.33
MSI2-201ENST00000284073 KITP10721 976 aa17.08■□□□□ 0.33
MSI2-201ENST00000284073 CDR2Q01850 454 aa17.08■□□□□ 0.33
MSI2-201ENST00000284073 OCA2Q04671 838 aa17.08■□□□□ 0.33
MSI2-201ENST00000284073 THAP9Q9H5L6 903 aa17.08■□□□□ 0.33
MSI2-201ENST00000284073 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.33
MSI2-201ENST00000284073 ATP8A2Q9NTI2 1148 aa17.08■□□□□ 0.33
MSI2-201ENST00000284073 KLRF2D3W0D1 207 aa17.08■□□□□ 0.32
MSI2-201ENST00000284073 SUPT3HO75486 399 aa17.08■□□□□ 0.32
MSI2-201ENST00000284073 IRX2Q9BZI1 471 aaPredicted RBP17.08■□□□□ 0.32
MSI2-201ENST00000284073 CCDC68Q9H2F9 335 aa17.08■□□□□ 0.32
MSI2-201ENST00000284073 NDST4Q9H3R1 872 aa17.08■□□□□ 0.32
MSI2-201ENST00000284073 SCHIP1Q9P0W5 487 aaPredicted RBP17.08■□□□□ 0.32
MSI2-201ENST00000284073 IFT140Q96RY7 1462 aa17.08■□□□□ 0.32
MSI2-201ENST00000284073 CFAP73A6NFT4 308 aa17.08■□□□□ 0.32
MSI2-201ENST00000284073 TBC1D10BQ4KMP7 808 aaPredicted RBP17.08■□□□□ 0.32
MSI2-201ENST00000284073 SIRT2Q8IXJ6 389 aa17.08■□□□□ 0.32
MSI2-201ENST00000284073 ADGRG1Q9Y653 693 aa17.08■□□□□ 0.32
MSI2-201ENST00000284073 SYNJ2BP-COX16A0A087WUM0 186 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 EIF4A1P60842 406 aaKnown RBP17.07■□□□□ 0.32
MSI2-201ENST00000284073 BABAM1Q9NWV8 329 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 COX16Q9P0S2 106 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 ZDHHC9Q9Y397 364 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 EPM2AIP1Q7L775 607 aaPredicted RBP17.07■□□□□ 0.32
MSI2-201ENST00000284073 ZNF473Q8WTR7 871 aaKnown RBP17.07■□□□□ 0.32
MSI2-201ENST00000284073 TGS1Q96RS0 853 aaKnown RBP17.07■□□□□ 0.32
MSI2-201ENST00000284073 NOP56O00567 594 aaKnown RBP17.07■□□□□ 0.32
MSI2-201ENST00000284073 KRT14P02533 472 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 PSMC1P62191 440 aaKnown RBP17.07■□□□□ 0.32
MSI2-201ENST00000284073 TMPRSS15P98073 1019 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 FKBP3Q00688 224 aaKnown RBP17.07■□□□□ 0.32
MSI2-201ENST00000284073 PTK2Q05397 1052 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 PABPC4Q13310 644 aaKnown RBP eCLIP17.07■□□□□ 0.325e-7■□□□□ 8.5
MSI2-201ENST00000284073 MTF1Q14872 753 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 LRRC24Q50LG9 513 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 LONP2Q86WA8 852 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 DHX40Q8IX18 779 aaKnown RBP17.07■□□□□ 0.32
MSI2-201ENST00000284073 EYA3Q99504 573 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 CARD10Q9BWT7 1032 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 GCNT4Q9P109 453 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 HAUS5O94927 633 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 KRT1P04264 644 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 TMTC4Q5T4D3 741 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 RINT1Q6NUQ1 792 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 SUPT20HQ8NEM7 779 aa17.07■□□□□ 0.32
MSI2-201ENST00000284073 KDM5BQ9UGL1 1544 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms