RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 COL4A5P29400 1685 aa12.56□□□□□ -0.4
SCLT1-201ENST00000281142 H0YHG0 523 aa12.56□□□□□ -0.4
SCLT1-201ENST00000281142 TACC1O75410 805 aa12.56□□□□□ -0.4
SCLT1-201ENST00000281142 YBX3P16989 372 aaKnown RBP eCLIP12.56□□□□□ -0.41e-6■■□□□ 12
SCLT1-201ENST00000281142 SCP2P22307 547 aa12.56□□□□□ -0.4
SCLT1-201ENST00000281142 KIF11P52732 1056 aa12.56□□□□□ -0.4
SCLT1-201ENST00000281142 SOGA3Q5TF21 947 aa12.56□□□□□ -0.4
SCLT1-201ENST00000281142 CCDC181Q5TID7 509 aa12.56□□□□□ -0.4
SCLT1-201ENST00000281142 IQCEQ6IPM2 695 aa12.56□□□□□ -0.4
SCLT1-201ENST00000281142 GIMAP8Q8ND71 665 aaPredicted RBP12.56□□□□□ -0.4
SCLT1-201ENST00000281142 MTMR8Q96EF0 704 aa12.56□□□□□ -0.4
SCLT1-201ENST00000281142 PSMD1Q99460 953 aa12.56□□□□□ -0.4
SCLT1-201ENST00000281142 NFKBIEO00221 500 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 HIBADHP31937 336 aaKnown RBP12.55□□□□□ -0.4
SCLT1-201ENST00000281142 LSP1P33241 339 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 NAA35Q5VZE5 725 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 C8orf74Q6P047 294 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 OTUD6BQ8N6M0 293 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 TRIM58Q8NG06 486 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 MAGEB6P1A0A0J9YX57 407 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 HDLBPQ00341 1268 aaKnown RBP12.55□□□□□ -0.4
SCLT1-201ENST00000281142 AOC3Q16853 763 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 CCDC155Q8N6L0 562 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 PIK3R5Q8WYR1 880 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 TLR10Q9BXR5 811 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 ZC3H12CQ9C0D7 883 aaKnown RBP12.55□□□□□ -0.4
SCLT1-201ENST00000281142 ZNF277Q9NRM2 450 aaPredicted RBP12.55□□□□□ -0.4
SCLT1-201ENST00000281142 MTMR7Q9Y216 660 aa12.55□□□□□ -0.4
SCLT1-201ENST00000281142 RHOBTB3O94955 611 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 EPB41P11171 864 aaKnown RBP12.54□□□□□ -0.4
SCLT1-201ENST00000281142 LONP1P36776 959 aaKnown RBP12.54□□□□□ -0.4
SCLT1-201ENST00000281142 USP8P40818 1118 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 GFPT1Q06210 699 aaPredicted RBP12.54□□□□□ -0.4
SCLT1-201ENST00000281142 GRIPAP1Q4V328 841 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 RNF187Q5TA31 235 aaPredicted RBP12.54□□□□□ -0.4
SCLT1-201ENST00000281142 PROCA1Q8NCQ7 364 aaPredicted RBP12.54□□□□□ -0.4
SCLT1-201ENST00000281142 P2RX5Q93086 422 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 EPB41L5Q9HCM4 733 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 HYOU1Q9Y4L1 999 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 MEFVO15553 781 aaPredicted RBP12.54□□□□□ -0.4
SCLT1-201ENST00000281142 RASSF7Q02833 373 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 GUCY2DQ02846 1103 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 PDE4DQ08499 809 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 DOK7Q18PE1 504 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 INF2Q27J81 1249 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 EMBQ6PCB8 327 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 ZNF804AQ7Z570 1209 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 MTA3Q9BTC8 594 aa12.54□□□□□ -0.4
SCLT1-201ENST00000281142 RBM28Q9NW13 759 aaKnown RBP12.54□□□□□ -0.4
SCLT1-201ENST00000281142 PACSIN2Q9UNF0 486 aaPredicted RBP12.54□□□□□ -0.4
SCLT1-201ENST00000281142 ZNF646O15015 1829 aaPredicted RBP12.54□□□□□ -0.4
SCLT1-201ENST00000281142 BACH1O14867 736 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 AKR1B10O60218 316 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 USO1O60763 962 aaKnown RBP12.53□□□□□ -0.4
SCLT1-201ENST00000281142 CYP2D6P10635 497 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 NAP1L1P55209 391 aaKnown RBP12.53□□□□□ -0.4
SCLT1-201ENST00000281142 ZNF572Q7Z3I7 529 aaPredicted RBP12.53□□□□□ -0.4
SCLT1-201ENST00000281142 ZNF473Q8WTR7 871 aaKnown RBP12.53□□□□□ -0.4
SCLT1-201ENST00000281142 EYA3Q99504 573 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 MMRN2Q9H8L6 949 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 LRRC53A6NM62 1247 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 HEXIM1O94992 359 aaKnown RBP12.53□□□□□ -0.4
SCLT1-201ENST00000281142 PLCG1P19174 1290 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 UBA7P41226 1012 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 SLC1A4P43007 532 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 PRELPP51888 382 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 KCNB1Q14721 858 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 SPRED3Q2MJR0 410 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 KLHDC7AQ5VTJ3 777 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 ALS2CLQ60I27 953 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 DTHD1Q6ZMT9 781 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 RRAGAQ7L523 313 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 IQCA1Q86XH1 822 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 IQCKQ8N0W5 287 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 RIOK1Q9BRS2 568 aaKnown RBP12.53□□□□□ -0.4
SCLT1-201ENST00000281142 NUP58Q9BVL2 599 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 TAOK3Q9H2K8 898 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 DBNDD1Q9H9R9 158 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 CD209Q9NNX6 404 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 KBTBD4Q9NVX7 518 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 JAG2Q9Y219 1238 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 SBF1O95248 1867 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 USP17L12C9JPN9 530 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 USP17L21D6R901 530 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 CCNE1P24864 410 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 PPP2R5BQ15173 497 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 PFKFB3Q16875 520 aaPredicted RBP12.53□□□□□ -0.4
SCLT1-201ENST00000281142 CFAP58Q5T655 872 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 BLIDQ8IZY5 108 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 CABS1Q96KC9 395 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 SEMA6BQ9H3T3 888 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 ANAPC4Q9UJX5 808 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 PLAGL2Q9UPG8 496 aa12.53□□□□□ -0.4
SCLT1-201ENST00000281142 PPIP5K2O43314 1243 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 FTCDO95954 541 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms