RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 KCNH4Q9UQ05 1017 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 ITGBL1O95965 494 aaPredicted RBP13.17□□□□□ -0.3
SSRP1-201ENST00000278412 CIITAP33076 1130 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 IRX3P78415 501 aaPredicted RBP13.17□□□□□ -0.3
SSRP1-201ENST00000278412 ITGB3BPQ13352 177 aaPredicted RBP13.17□□□□□ -0.3
SSRP1-201ENST00000278412 PPIL2Q13356 520 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 CTTNQ14247 550 aaKnown RBP13.17□□□□□ -0.3
SSRP1-201ENST00000278412 PGM5Q15124 567 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 LBX2Q6XYB7 198 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 SPATA20Q8TB22 786 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 CYP39A1Q9NYL5 469 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 RBPJLQ9UBG7 517 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 LOC285556D6RIA3 1793 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 MCM3APO60318 1980 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 TMEM150BA6NC51 233 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 RGS20O76081 388 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 SSBP05455 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
SSRP1-201ENST00000278412 SPATA31C1P0DKV0 1188 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 CCT6AP40227 531 aaKnown RBP13.17□□□□□ -0.3
SSRP1-201ENST00000278412 MORC3Q14149 939 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 Q4G0T1 1027 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 NCAPG2Q86XI2 1143 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 CATSPER3Q86XQ3 398 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 BRI3BPQ8WY22 251 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 MS4A4AQ96JQ5 239 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 PTPN18Q99952 460 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 GLT8D2Q9H1C3 349 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 KCNH7Q9NS40 1196 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 RPTORQ8N122 1335 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 KIAA1217Q5T5P2 1943 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 MYMKA6NI61 221 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 KLRC4O43908 158 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 CYP3A4P08684 503 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 FCER1AP12319 257 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 GCFC2P16383 781 aaKnown RBP13.16□□□□□ -0.3
SSRP1-201ENST00000278412 SP4Q02446 784 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 SPC24Q8NBT2 197 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 PDCD2LQ9BRP1 358 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 MOV10L1Q9BXT6 1211 aaKnown RBP13.16□□□□□ -0.3
SSRP1-201ENST00000278412 FGFBP2Q9BYJ0 223 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 PORCNQ9H237 461 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 PXMP2Q9NR77 195 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 HOXC10Q9NYD6 342 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 TESPA1A2RU30 521 aaPredicted RBP13.16□□□□□ -0.3
SSRP1-201ENST00000278412 TXLNAP40222 546 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 TMEM266Q2M3C6 531 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 NT5DC1Q5TFE4 455 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 WDR78Q5VTH9 848 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 EEPD1Q7L9B9 569 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 PIGOQ8TEQ8 1089 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 UNC45AQ9H3U1 944 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 KBTBD4Q9NVX7 518 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
SSRP1-201ENST00000278412 RBM10P98175 930 aaKnown RBP13.15□□□□□ -0.3
SSRP1-201ENST00000278412 SEMA3FQ13275 785 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 TMEM63BQ5T3F8 832 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 LRCH2Q5VUJ6 765 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 ZNF577Q9BSK1 485 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 RBBP6Q7Z6E9 1792 aaKnown RBP13.15□□□□□ -0.3
SSRP1-201ENST00000278412 BTBD19C9JJ37 291 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 PSMD10O75832 226 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 ERCC3P19447 782 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 ARHGEF16Q5VV41 709 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 ZNF830Q96NB3 372 aaPredicted RBP13.15□□□□□ -0.3
SSRP1-201ENST00000278412 ZIC5Q96T25 663 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 MXRA8Q9BRK3 442 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 SPATC1LQ9H0A9 340 aa13.15□□□□□ -0.3
SSRP1-201ENST00000278412 DOCK3Q8IZD9 2030 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 TRIM49BA6NDI0 452 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 IPO5O00410 1097 aaKnown RBP13.14□□□□□ -0.31
SSRP1-201ENST00000278412 RPN1P04843 607 aaKnown RBP13.14□□□□□ -0.31
SSRP1-201ENST00000278412 HOXA7P31268 230 aaPredicted RBP13.14□□□□□ -0.31
SSRP1-201ENST00000278412 PMS1P54277 932 aaKnown RBP13.14□□□□□ -0.31
SSRP1-201ENST00000278412 GRM1Q13255 1194 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 PABPC4Q13310 644 aaKnown RBP eCLIP13.14□□□□□ -0.312e-9■■□□□ 13.3
SSRP1-201ENST00000278412 KMT5BQ4FZB7 885 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 KRT79Q5XKE5 535 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 OTOP1Q7RTM1 612 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 BANK1Q8NDB2 785 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 AK8Q96MA6 479 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 TRIM9Q9C026 710 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 EFCC1Q9HA90 598 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 FANCLQ9NW38 375 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 TBC1D7Q9P0N9 293 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 CXCL11O14625 94 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 NKRFO15226 690 aaKnown RBP eCLIP13.14□□□□□ -0.31
SSRP1-201ENST00000278412 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
SSRP1-201ENST00000278412 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
SSRP1-201ENST00000278412 TMEM119Q4V9L6 283 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 ANKRD13CQ8N6S4 541 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 ACAD9Q9H845 621 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 BMP2KQ9NSY1 1161 aaPredicted RBP13.14□□□□□ -0.31
SSRP1-201ENST00000278412 NRBP1Q9UHY1 535 aa13.14□□□□□ -0.31
SSRP1-201ENST00000278412 CCL15-CCL14A0A0B4J2E2 113 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 NR3C2P08235 984 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 HUNKP57058 714 aa13.13□□□□□ -0.31
SSRP1-201ENST00000278412 PDIA5Q14554 519 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms