RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 PHF20L1A8MW92 1017 aa18.71■□□□□ 0.59
SRF-201ENST00000265354 EXOC3O60645 756 aa18.71■□□□□ 0.59
SRF-201ENST00000265354 TPH2Q8IWU9 490 aa18.71■□□□□ 0.59
SRF-201ENST00000265354 DNM3Q9UQ16 869 aa18.71■□□□□ 0.59
SRF-201ENST00000265354 ANO9A1A5B4 782 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 MEFVO15553 781 aaPredicted RBP18.7■□□□□ 0.58
SRF-201ENST00000265354 MESDQ14696 234 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 FAM83BQ5T0W9 1011 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 CCDC197Q8NCU1 140 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 COL4A3BPQ9Y5P4 624 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 MAP2K7O14733 419 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 PPP1R37O75864 691 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 FGGP02679 453 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 RFC4P35249 363 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 SNX1Q13596 522 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 CCDC38Q502W7 563 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 TPX2Q9ULW0 747 aaKnown RBP18.7■□□□□ 0.58
SRF-201ENST00000265354 USTQ9Y2C2 406 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 RFX7Q2KHR2 1363 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 ABCC12Q96J65 1359 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 PXDNLA1KZ92 1463 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 CHUKO15111 745 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 DAPK3O43293 454 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 LSP1P33241 339 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 ATP11AP98196 1134 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 HDLBPQ00341 1268 aaKnown RBP18.7■□□□□ 0.58
SRF-201ENST00000265354 MTMR3Q13615 1198 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 SETDB1Q15047 1291 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 TRIP13Q15645 432 aaPredicted RBP18.7■□□□□ 0.58
SRF-201ENST00000265354 CCDC77Q9BR77 488 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 PGRMC1O00264 195 aaKnown RBP18.7■□□□□ 0.58
SRF-201ENST00000265354 LRRC14Q15048 493 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 TRAPPC11Q7Z392 1133 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 GDAP1Q8TB36 358 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 FRMD4BQ9Y2L6 1034 aa18.7■□□□□ 0.58
SRF-201ENST00000265354 ADGRL3Q9HAR2 1447 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 STX2P32856 288 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 ZNF131P52739 623 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 ZYXQ15942 572 aaKnown RBP18.69■□□□□ 0.58
SRF-201ENST00000265354 TMEM139Q8IV31 216 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 PHF20Q9BVI0 1012 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 VEGFAP15692 232 aaPredicted RBP18.69■□□□□ 0.58
SRF-201ENST00000265354 PFKFB3Q16875 520 aaPredicted RBP18.69■□□□□ 0.58
SRF-201ENST00000265354 PARP10Q53GL7 1025 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 CCDC174Q6PII3 467 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 ARHGEF2Q92974 986 aaKnown RBP18.69■□□□□ 0.58
SRF-201ENST00000265354 DDX25Q9UHL0 483 aaKnown RBP18.69■□□□□ 0.58
SRF-201ENST00000265354 PDE2AO00408 941 aaPredicted RBP18.69■□□□□ 0.58
SRF-201ENST00000265354 KRT5P13647 590 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 HERVK_113P62684 666 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 MXRA7P84157 204 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 KLC4Q9NSK0 619 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 DAAM1Q9Y4D1 1078 aa18.69■□□□□ 0.58
SRF-201ENST00000265354 PSMD14O00487 310 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 HLA-DOAP06340 250 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 SATB1Q01826 763 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 ARL6IP4Q66PJ3 421 aaKnown RBP18.68■□□□□ 0.58
SRF-201ENST00000265354 STMN4Q9H169 189 aaPredicted RBP18.68■□□□□ 0.58
SRF-201ENST00000265354 ARAP3Q8WWN8 1544 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 KLHL29Q96CT2 875 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 NBPF3Q9H094 633 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 HSD3B7Q9H2F3 369 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 HAUS2Q9NVX0 235 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 WDR19Q8NEZ3 1342 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 CDHR2Q9BYE9 1310 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 GMNCA6NCL1 334 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 UFL1O94874 794 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 PRPF6O94906 941 aaKnown RBP18.68■□□□□ 0.58
SRF-201ENST00000265354 MYO1EQ12965 1108 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 RPUSD2Q8IZ73 545 aaKnown RBP18.68■□□□□ 0.58
SRF-201ENST00000265354 TRIM9Q9C026 710 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 RAB17Q9H0T7 212 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 FBXL5Q9UKA1 691 aa18.68■□□□□ 0.58
SRF-201ENST00000265354 ARHGEF28Q8N1W1 1705 aaKnown RBP18.68■□□□□ 0.58
SRF-201ENST00000265354 PLVAPQ9BX97 442 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 NUCKS1Q9H1E3 243 aaKnown RBP18.67■□□□□ 0.58
SRF-201ENST00000265354 RAB21Q9UL25 225 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 KRT15P19012 456 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 ZNF473Q8WTR7 871 aaKnown RBP18.67■□□□□ 0.58
SRF-201ENST00000265354 NGLY1Q96IV0 654 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 PSTPIP2Q9H939 334 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 VIPAS39Q9H9C1 493 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 DLC1Q96QB1 1528 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 GNPATO15228 680 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 PRPHP41219 470 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 KCTD1Q719H9 257 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 MDM1Q8TC05 714 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 BICD1Q96G01 975 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 FMO2Q99518 471 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 PRM3Q9NNZ6 103 aa18.67■□□□□ 0.58
SRF-201ENST00000265354 E9PMD0 336 aa18.66■□□□□ 0.58
SRF-201ENST00000265354 ACSL3O95573 720 aa18.66■□□□□ 0.58
SRF-201ENST00000265354 SRGNP10124 158 aa18.66■□□□□ 0.58
SRF-201ENST00000265354 COPB2P35606 906 aa18.66■□□□□ 0.58
SRF-201ENST00000265354 ATP6V1G3Q96LB4 118 aa18.66■□□□□ 0.58
SRF-201ENST00000265354 ADAM33Q9BZ11 813 aa18.66■□□□□ 0.58
SRF-201ENST00000265354 EMILIN3Q9NT22 766 aa18.66■□□□□ 0.58
SRF-201ENST00000265354 SETSIPP0DME0 302 aa18.66■□□□□ 0.58
SRF-201ENST00000265354 UBXN2AP68543 259 aa18.66■□□□□ 0.58
SRF-201ENST00000265354 STXBP4Q6ZWJ1 553 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms