RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 TBX3O15119 743 aa16.22■□□□□ 0.19
SSBP1-201ENST00000265304 NKRFO15226 690 aaKnown RBP eCLIP16.22■□□□□ 0.19
SSBP1-201ENST00000265304 PRKAR2AP13861 404 aaKnown RBP16.22■□□□□ 0.19
SSBP1-201ENST00000265304 NUCB2P80303 420 aa16.22■□□□□ 0.19
SSBP1-201ENST00000265304 SETQ01105 290 aaPredicted RBP16.22■□□□□ 0.19
SSBP1-201ENST00000265304 CCDC144BQ3MJ40 725 aa16.22■□□□□ 0.19
SSBP1-201ENST00000265304 SLC9C1Q4G0N8 1177 aa16.22■□□□□ 0.19
SSBP1-201ENST00000265304 DUSP28Q4G0W2 176 aa16.22■□□□□ 0.19
SSBP1-201ENST00000265304 PRAMEF19Q5SWL8 479 aa16.22■□□□□ 0.19
SSBP1-201ENST00000265304 C4orf32Q8N8J7 132 aa16.22■□□□□ 0.19
SSBP1-201ENST00000265304 PDGFCQ9NRA1 345 aa16.22■□□□□ 0.19
SSBP1-201ENST00000265304 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.22■□□□□ 0.19
SSBP1-201ENST00000265304 KCNH7Q9NS40 1196 aa16.22■□□□□ 0.19
SSBP1-201ENST00000265304 FAM184BQ9ULE4 1060 aa16.22■□□□□ 0.19
SSBP1-201ENST00000265304 GNEQ9Y223 722 aaKnown RBP16.22■□□□□ 0.19
SSBP1-201ENST00000265304 NFASCO94856 1347 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 MYH9P35579 1960 aaKnown RBP16.21■□□□□ 0.19
SSBP1-201ENST00000265304 WNT7AO00755 349 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 DHX15O43143 795 aaKnown RBP16.21■□□□□ 0.19
SSBP1-201ENST00000265304 MSCO60682 206 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 F13A1P00488 732 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 KCNA2P16389 499 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 TTLL4Q14679 1199 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 ATL3Q6DD88 541 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 MCTP1Q6DN14 999 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 B3GNT9Q6UX72 402 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 FBXO16Q8IX29 292 aaPredicted RBP16.21■□□□□ 0.19
SSBP1-201ENST00000265304 ETNPPLQ8TBG4 499 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 MTMR9Q96QG7 549 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 WDR11Q9BZH6 1224 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 MCOLN1Q9GZU1 580 aa16.21■□□□□ 0.19
SSBP1-201ENST00000265304 HMX1Q9NP08 348 aaPredicted RBP16.21■□□□□ 0.19
SSBP1-201ENST00000265304 POTEFA5A3E0 1075 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 ADCY6O43306 1168 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 DUSP11O75319 330 aaKnown RBP16.2■□□□□ 0.18
SSBP1-201ENST00000265304 ARIH2O95376 493 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 TDP2O95551 362 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 ARP10275 920 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 HOXD8P13378 290 aaPredicted RBP16.2■□□□□ 0.18
SSBP1-201ENST00000265304 AKR1A1P14550 325 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 SP2Q02086 613 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 MTMR1Q13613 665 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 LETM2Q2VYF4 491 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 LHX8Q68G74 356 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 PLA2G4DQ86XP0 818 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 GIMAP8Q8ND71 665 aaPredicted RBP16.2■□□□□ 0.18
SSBP1-201ENST00000265304 SH3TC2Q8TF17 1288 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 SLC5A5Q92911 643 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 FAM20AQ96MK3 541 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 RIT2Q99578 217 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 UPF3AQ9H1J1 476 aaKnown RBP16.2■□□□□ 0.18
SSBP1-201ENST00000265304 AGO4Q9HCK5 861 aaKnown RBP16.2■□□□□ 0.18
SSBP1-201ENST00000265304 RTEL1Q9NZ71 1219 aa16.2■□□□□ 0.18
SSBP1-201ENST00000265304 NOL7Q9UMY1 257 aaKnown RBP16.2■□□□□ 0.18
SSBP1-201ENST00000265304 LAD1O00515 517 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 MSH4O15457 936 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 ATP9AO75110 1047 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 SMPD1P17405 629 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 CCND3P30281 292 aaPredicted RBP16.19■□□□□ 0.18
SSBP1-201ENST00000265304 ZNF76P36508 570 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 ADCYAP1R1P41586 468 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 TNFAIP2Q03169 654 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 GNL2Q13823 731 aaKnown RBP16.19■□□□□ 0.18
SSBP1-201ENST00000265304 NEDD9Q14511 834 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 TTC38Q5R3I4 469 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 SEPT14Q6ZU15 432 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 EEPD1Q7L9B9 569 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 FERMT3Q86UX7 667 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 HAS1Q92839 578 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 TBC1D22BQ9NU19 505 aa16.19■□□□□ 0.18
SSBP1-201ENST00000265304 DAXXQ9UER7 740 aaPredicted RBP16.19■□□□□ 0.18
SSBP1-201ENST00000265304 DDX25Q9UHL0 483 aaKnown RBP16.19■□□□□ 0.18
SSBP1-201ENST00000265304 IPO5O00410 1097 aaKnown RBP16.18■□□□□ 0.18
SSBP1-201ENST00000265304 CTAGE5O15320 804 aa16.18■□□□□ 0.18
SSBP1-201ENST00000265304 SLC37A4O43826 429 aa16.18■□□□□ 0.18
SSBP1-201ENST00000265304 CCNT1O60563 726 aaKnown RBP16.18■□□□□ 0.18
SSBP1-201ENST00000265304 PSMD10O75832 226 aa16.18■□□□□ 0.18
SSBP1-201ENST00000265304 TXNP10599 105 aaKnown RBP16.18■□□□□ 0.18
SSBP1-201ENST00000265304 GJA9P57773 515 aa16.18■□□□□ 0.18
SSBP1-201ENST00000265304 ARHGAP1Q07960 439 aa16.18■□□□□ 0.18
SSBP1-201ENST00000265304 PRR16Q569H4 304 aa16.18■□□□□ 0.18
SSBP1-201ENST00000265304 CELF3Q5SZQ8 465 aaKnown RBP16.18■□□□□ 0.18
SSBP1-201ENST00000265304 ZFP91Q96JP5 570 aaPredicted RBP16.18■□□□□ 0.18
SSBP1-201ENST00000265304 CRISPLD2Q9H0B8 497 aa16.18■□□□□ 0.18
SSBP1-201ENST00000265304 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.18■□□□□ 0.18
SSBP1-201ENST00000265304 DDX20Q9UHI6 824 aaKnown RBP16.18■□□□□ 0.18
SSBP1-201ENST00000265304 PCDHB6Q9Y5E3 794 aa16.18■□□□□ 0.18
SSBP1-201ENST00000265304 SCN10AQ9Y5Y9 1956 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.17■□□□□ 0.18
SSBP1-201ENST00000265304 A6NJR5 290 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 ATG7O95352 703 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 BMP15O95972 392 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 GJB1P08034 283 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 CCL5P13501 91 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 UBA1P22314 1058 aaKnown RBP16.17■□□□□ 0.18
SSBP1-201ENST00000265304 CST5P28325 142 aaPredicted RBP16.17■□□□□ 0.18
SSBP1-201ENST00000265304 PRPHP41219 470 aa16.17■□□□□ 0.18
SSBP1-201ENST00000265304 NASPP49321 788 aaPredicted RBP16.17■□□□□ 0.18
SSBP1-201ENST00000265304 ITGB3BPQ13352 177 aaPredicted RBP16.17■□□□□ 0.18
SSBP1-201ENST00000265304 LAMC2Q13753 1193 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms