RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 HYIQ5T013 277 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 ARHGEF16Q5VV41 709 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 BRI3BPQ8WY22 251 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 ZFP91Q96JP5 570 aaPredicted RBP25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 MOV10L1Q9BXT6 1211 aaKnown RBP25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 CBX8Q9HC52 389 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 TXNRD2Q9NNW7 524 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 KBTBD4Q9NVX7 518 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 MAN1B1Q9UKM7 699 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 GTPBP6O43824 516 aaPredicted RBP25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 SMC2O95347 1197 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 ARP10275 920 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 ZNF165P49910 485 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 XRRA1Q6P2D8 792 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 STAMQ92783 540 aa25.74■■□□□ 1.71
SMARCB1-201ENST00000263121 PSMD10O75832 226 aa25.73■■□□□ 1.71
SMARCB1-201ENST00000263121 MKRN3Q13064 507 aaKnown RBP25.73■■□□□ 1.71
SMARCB1-201ENST00000263121 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.73■■□□□ 1.71
SMARCB1-201ENST00000263121 ANKRD23Q86SG2 305 aa25.73■■□□□ 1.71
SMARCB1-201ENST00000263121 TRIML1Q8N9V2 468 aa25.73■■□□□ 1.71
SMARCB1-201ENST00000263121 GTF3C2Q8WUA4 911 aaPredicted RBP25.73■■□□□ 1.71
SMARCB1-201ENST00000263121 JADE2Q9NQC1 790 aa25.73■■□□□ 1.71
SMARCB1-201ENST00000263121 STK17AQ9UEE5 414 aa25.73■■□□□ 1.71
SMARCB1-201ENST00000263121 PFASO15067 1338 aa25.72■■□□□ 1.71
SMARCB1-201ENST00000263121 KDM3AQ9Y4C1 1321 aa25.72■■□□□ 1.71
SMARCB1-201ENST00000263121 BTBD19C9JJ37 291 aa25.72■■□□□ 1.71
SMARCB1-201ENST00000263121 SLC25A27O95847 323 aa25.72■■□□□ 1.71
SMARCB1-201ENST00000263121 CASP1P29466 404 aa25.72■■□□□ 1.71
SMARCB1-201ENST00000263121 COPB2P35606 906 aa25.72■■□□□ 1.71
SMARCB1-201ENST00000263121 HUNKP57058 714 aa25.72■■□□□ 1.71
SMARCB1-201ENST00000263121 NSUN6Q8TEA1 469 aaKnown RBP25.72■■□□□ 1.71
SMARCB1-201ENST00000263121 CDK5RAP3Q96JB5 506 aa25.72■■□□□ 1.71
SMARCB1-201ENST00000263121 MORC3Q14149 939 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 LRCH2Q5VUJ6 765 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 ZNF577Q9BSK1 485 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 BLOC1S4Q9NUP1 217 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 STK24Q9Y6E0 443 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 PASKQ96RG2 1323 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 PDHXO00330 501 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 MYL1P05976 194 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 BMP6P22004 513 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 CCT6AP40227 531 aaKnown RBP25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 PPP2R5CQ13362 524 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 CUL4BQ13620 913 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 ECM1Q16610 540 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 ISM2Q6H9L7 571 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 NCAPH2Q6IBW4 605 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 OTOP1Q7RTM1 612 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 VSIG10LQ86VR7 867 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 NCAPG2Q86XI2 1143 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 GSDMAQ96QA5 445 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 WDR11Q9BZH6 1224 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 KCNH7Q9NS40 1196 aa25.71■■□□□ 1.71
SMARCB1-201ENST00000263121 NR3C2P08235 984 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 CYP2C8P10632 490 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 MYCLP12524 364 aaPredicted RBP25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 ERCC3P19447 782 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 CCND2P30279 289 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 IQCB1Q15051 598 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 Q3C1V9 767 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 HAUS3Q68CZ6 603 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 LUZP1Q86V48 1076 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 ANKRD35Q8N283 1001 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 RIT2Q99578 217 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 BPIFA3Q9BQP9 254 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 NAT10Q9H0A0 1025 aaKnown RBP25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 NT5C3AQ9H0P0 336 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 BLZF1Q9H2G9 400 aa25.7■■□□□ 1.7
SMARCB1-201ENST00000263121 IPO5O00410 1097 aaKnown RBP25.69■■□□□ 1.7
SMARCB1-201ENST00000263121 B3GNT9Q6UX72 402 aa25.69■■□□□ 1.7
SMARCB1-201ENST00000263121 ERMNQ8TAM6 284 aa25.69■■□□□ 1.7
SMARCB1-201ENST00000263121 AGO4Q9HCK5 861 aaKnown RBP25.69■■□□□ 1.7
SMARCB1-201ENST00000263121 GAS7O60861 476 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 MTMR1Q13613 665 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 DNERQ8NFT8 737 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 RAD54LQ92698 747 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 EML1O00423 815 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 MED24O75448 989 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 ERVK-9P63128 1117 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 ERVK-24P63145 666 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 KCNK18Q7Z418 384 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 RASAL3Q86YV0 1011 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 LARP4BQ92615 738 aaKnown RBP25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 TEKT3Q9BXF9 490 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 R3HDMLQ9H3Y0 253 aa25.68■■□□□ 1.7
SMARCB1-201ENST00000263121 TESPA1A2RU30 521 aaPredicted RBP25.67■■□□□ 1.7
SMARCB1-201ENST00000263121 RPA1P27694 616 aa25.67■■□□□ 1.7
SMARCB1-201ENST00000263121 FAM43AQ8N2R8 423 aa25.67■■□□□ 1.7
SMARCB1-201ENST00000263121 SHCBP1Q8NEM2 672 aa25.67■■□□□ 1.7
SMARCB1-201ENST00000263121 IWS1Q96ST2 819 aa25.67■■□□□ 1.7
SMARCB1-201ENST00000263121 GPBP1L1Q9HC44 474 aaPredicted RBP25.67■■□□□ 1.7
SMARCB1-201ENST00000263121 ASTN1O14525 1302 aa25.67■■□□□ 1.7
SMARCB1-201ENST00000263121 POTEB3A0JP26 581 aa25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 DHX15O43143 795 aaKnown RBP25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 SPATA31C1P0DKV0 1188 aa25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 CNTN2Q02246 1040 aa25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 POTEBQ6S5H4 581 aa25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 SV2BQ7L1I2 683 aa25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 SAPCD2Q86UD0 394 aa25.66■■□□□ 1.7
SMARCB1-201ENST00000263121 CATSPER3Q86XQ3 398 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms