RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 NT5C3AQ9H0P0 336 aa25.06■■□□□ 1.6
SIX3-201ENST00000260653 RNF146Q9NTX7 359 aa25.06■■□□□ 1.6
SIX3-201ENST00000260653 PNMA2Q9UL42 364 aa25.06■■□□□ 1.6
SIX3-201ENST00000260653 ZKSCAN5Q9Y2L8 839 aa25.06■■□□□ 1.6
SIX3-201ENST00000260653 GOLGA6L6A8MZA4 724 aa25.05■■□□□ 1.6
SIX3-201ENST00000260653 TTLL12Q14166 644 aaPredicted RBP25.05■■□□□ 1.6
SIX3-201ENST00000260653 TREML2Q5T2D2 321 aa25.05■■□□□ 1.6
SIX3-201ENST00000260653 KIAA1024Q9UPX6 916 aa25.05■■□□□ 1.6
SIX3-201ENST00000260653 SPDYE16A6NNV3 312 aaPredicted RBP25.05■■□□□ 1.6
SIX3-201ENST00000260653 TMEM132BQ14DG7 1078 aa25.05■■□□□ 1.6
SIX3-201ENST00000260653 OTUD5Q96G74 571 aa25.05■■□□□ 1.6
SIX3-201ENST00000260653 SAMSN1Q9NSI8 373 aaKnown RBP25.05■■□□□ 1.6
SIX3-201ENST00000260653 IQCA1LA6NCM1 817 aa25.04■■□□□ 1.6
SIX3-201ENST00000260653 IRF6O14896 467 aa25.04■■□□□ 1.6
SIX3-201ENST00000260653 COBLO75128 1261 aa25.04■■□□□ 1.6
SIX3-201ENST00000260653 ZNF18P17022 549 aa25.04■■□□□ 1.6
SIX3-201ENST00000260653 PRCPP42785 496 aa25.04■■□□□ 1.6
SIX3-201ENST00000260653 HAUS3Q68CZ6 603 aa25.04■■□□□ 1.6
SIX3-201ENST00000260653 NSMFQ6X4W1 530 aa25.04■■□□□ 1.6
SIX3-201ENST00000260653 FAM43AQ8N2R8 423 aa25.04■■□□□ 1.6
SIX3-201ENST00000260653 ANKRD13AQ8IZ07 590 aa25.04■■□□□ 1.6
SIX3-201ENST00000260653 POTEFA5A3E0 1075 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 E9PMD0 336 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 MEIS1O00470 390 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 POTEIP0CG38 1075 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 OAZ1P54368 228 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 POTEGQ6S5H5 508 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 POTEEQ6S8J3 1075 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 RNF207Q6ZRF8 634 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 DYMQ7RTS9 669 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 CATSPER3Q86XQ3 398 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 TAAR1Q96RJ0 339 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 MAP3K20Q9NYL2 800 aaKnown RBP25.03■■□□□ 1.6
SIX3-201ENST00000260653 ARP10275 920 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 PTGS1P23219 599 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 PDE4DQ08499 809 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 CCDC144BQ3MJ40 725 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 LRCH2Q5VUJ6 765 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 SPATA1Q5VX52 437 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 CCDC186Q7Z3E2 898 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 GIMAP8Q8ND71 665 aaPredicted RBP25.03■■□□□ 1.6
SIX3-201ENST00000260653 PURBQ96QR8 312 aaKnown RBP25.03■■□□□ 1.6
SIX3-201ENST00000260653 EXOC1Q9NV70 894 aa25.03■■□□□ 1.6
SIX3-201ENST00000260653 EML1O00423 815 aa25.02■■□□□ 1.6
SIX3-201ENST00000260653 PSMD10O75832 226 aa25.02■■□□□ 1.6
SIX3-201ENST00000260653 SERPINC1P01008 464 aa25.02■■□□□ 1.6
SIX3-201ENST00000260653 ITGB5P18084 799 aa25.02■■□□□ 1.6
SIX3-201ENST00000260653 ERMNQ8TAM6 284 aa25.02■■□□□ 1.6
SIX3-201ENST00000260653 SLC5A5Q92911 643 aa25.02■■□□□ 1.6
SIX3-201ENST00000260653 MXRA8Q9BRK3 442 aa25.02■■□□□ 1.6
SIX3-201ENST00000260653 HOXC10Q9NYD6 342 aa25.02■■□□□ 1.6
SIX3-201ENST00000260653 RABGAP1Q9Y3P9 1069 aa25.02■■□□□ 1.6
SIX3-201ENST00000260653 SPATA31C1P0DKV0 1188 aa25.02■■□□□ 1.6
SIX3-201ENST00000260653 SETQ01105 290 aaPredicted RBP25.02■■□□□ 1.6
SIX3-201ENST00000260653 PAK1Q13153 545 aa25.02■■□□□ 1.6
SIX3-201ENST00000260653 POTEJP0CG39 1038 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 EIF2AK2P19525 551 aaKnown RBP25.01■■□□□ 1.59
SIX3-201ENST00000260653 MSNP26038 577 aaKnown RBP25.01■■□□□ 1.59
SIX3-201ENST00000260653 PPATQ06203 517 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 ADSSL1Q8N142 457 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 SAMD3Q8N6K7 520 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 NELFBQ8WX92 580 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 FRMPD4Q14CM0 1322 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 MYPNQ86TC9 1320 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 SLC26A4O43511 780 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 RPA1P27694 616 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 UBASH3AP57075 661 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 SEMA3FQ13275 785 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 OTOP1Q7RTM1 612 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 ERO1BQ86YB8 467 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 DDX12PQ92771 950 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 ZNF577Q9BSK1 485 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 TEX13BQ9BXU2 312 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 KCNF1Q9H3M0 494 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 RWDD2AQ9UIY3 292 aa25.01■■□□□ 1.59
SIX3-201ENST00000260653 ATP2A1O14983 1001 aa25■■□□□ 1.59
SIX3-201ENST00000260653 SSBP05455 408 aaKnown RBP eCLIP25■■□□□ 1.59
SIX3-201ENST00000260653 FCER1AP12319 257 aa25■■□□□ 1.59
SIX3-201ENST00000260653 CYP4A11Q02928 519 aa25■■□□□ 1.59
SIX3-201ENST00000260653 BAATQ14032 418 aaPredicted RBP25■■□□□ 1.59
SIX3-201ENST00000260653 PLS1Q14651 629 aa25■■□□□ 1.59
SIX3-201ENST00000260653 PCNX4Q63HM2 1172 aa25■■□□□ 1.59
SIX3-201ENST00000260653 HPS3Q969F9 1004 aa25■■□□□ 1.59
SIX3-201ENST00000260653 CCDC47Q96A33 483 aaKnown RBP25■■□□□ 1.59
SIX3-201ENST00000260653 LOC285556D6RIA3 1793 aa25■■□□□ 1.59
SIX3-201ENST00000260653 CHMP2AO43633 222 aa25■■□□□ 1.59
SIX3-201ENST00000260653 GAS7O60861 476 aa25■■□□□ 1.59
SIX3-201ENST00000260653 MRPS9P82933 396 aaKnown RBP25■■□□□ 1.59
SIX3-201ENST00000260653 STK4Q13043 487 aa25■■□□□ 1.59
SIX3-201ENST00000260653 GADL1Q6ZQY3 521 aa25■■□□□ 1.59
SIX3-201ENST00000260653 PNMA8AQ86V59 439 aaPredicted RBP25■■□□□ 1.59
SIX3-201ENST00000260653 SPDYE5A6NIY4 337 aa24.99■■□□□ 1.59
SIX3-201ENST00000260653 CDK11BP21127 795 aaKnown RBP24.99■■□□□ 1.59
SIX3-201ENST00000260653 NAP1L5Q96NT1 182 aaPredicted RBP24.99■■□□□ 1.59
SIX3-201ENST00000260653 RMDN3Q96TC7 470 aa24.99■■□□□ 1.59
SIX3-201ENST00000260653 WDR11Q9BZH6 1224 aa24.99■■□□□ 1.59
SIX3-201ENST00000260653 A0A0G2JLL6 359 aaPredicted RBP24.99■■□□□ 1.59
SIX3-201ENST00000260653 PLA2G4BP0C869 781 aa24.99■■□□□ 1.59
SIX3-201ENST00000260653 PGM5Q15124 567 aa24.99■■□□□ 1.59
SIX3-201ENST00000260653 UNC13DQ70J99 1090 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms