RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 YEATS4O95619 227 aa17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 ATP2C1P98194 919 aaPredicted RBP17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 SLC39A14Q15043 492 aa17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 SEPT14Q6ZU15 432 aa17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 ETNPPLQ8TBG4 499 aa17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 HAS1Q92839 578 aa17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 GJA10Q969M2 543 aa17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 GPRASP2Q96D09 838 aa17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 MTMR9Q96QG7 549 aa17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 KCNMB3Q9NPA1 279 aa17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 CEP131Q9UPN4 1083 aa17.91■□□□□ 0.46
CCDC90B-201ENST00000260054 LBX1P52954 281 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 CALCRLQ16602 461 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 GNPTABQ3T906 1256 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 NLRX1Q86UT6 975 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 RAET1EQ8TD07 263 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 VTA1Q9NP79 307 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 PDGFCQ9NRA1 345 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 SPATA31C2B4DYI2 1134 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 BMP15O95972 392 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 OR52Z1P0C646 297 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 ELNP15502 786 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 MARCKSP29966 332 aaPredicted RBP17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 ICAM3P32942 547 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 CTCFP49711 727 aaPredicted RBP17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 PRMT2P55345 433 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 STK38Q15208 465 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 PRAMEF19Q5SWL8 479 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 TAPT1Q6NXT6 567 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 LEO1Q8WVC0 666 aaPredicted RBP17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 ABHD16BQ9H3Z7 469 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 RCOR1Q9UKL0 485 aa17.9■□□□□ 0.46
CCDC90B-201ENST00000260054 CENPFP49454 3210 aa17.89■□□□□ 0.46
CCDC90B-201ENST00000260054 SPTLC2O15270 562 aa17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 MAFGO15525 162 aa17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 ADCY3O60266 1144 aa17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 ATP9AO75110 1047 aa17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 ACVR2BQ13705 512 aa17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 SPATA32Q96LK8 384 aa17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 ZNF577Q9BSK1 485 aa17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 SCAND2PQ9GZW5 306 aaPredicted RBP17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 AGO4Q9HCK5 861 aaKnown RBP17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 PKD2L1Q9P0L9 805 aa17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 ZHX1Q9UKY1 873 aaPredicted RBP17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 PTCH2Q9Y6C5 1203 aa17.89■□□□□ 0.45
CCDC90B-201ENST00000260054 KIAA1217Q5T5P2 1943 aa17.88■□□□□ 0.45
CCDC90B-201ENST00000260054 LAD1O00515 517 aa17.88■□□□□ 0.45
CCDC90B-201ENST00000260054 TBX3O15119 743 aa17.88■□□□□ 0.45
CCDC90B-201ENST00000260054 ARIH2O95376 493 aa17.88■□□□□ 0.45
CCDC90B-201ENST00000260054 TRIM32Q13049 653 aa17.88■□□□□ 0.45
CCDC90B-201ENST00000260054 ITGB3BPQ13352 177 aaPredicted RBP17.88■□□□□ 0.45
CCDC90B-201ENST00000260054 IL17AQ16552 155 aa17.88■□□□□ 0.45
CCDC90B-201ENST00000260054 TRMT44Q8IYL2 757 aaKnown RBP17.88■□□□□ 0.45
CCDC90B-201ENST00000260054 MORC2Q9Y6X9 1032 aaPredicted RBP17.88■□□□□ 0.45
CCDC90B-201ENST00000260054 IPO5O00410 1097 aaKnown RBP17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 ZNF865P0CJ78 1059 aaPredicted RBP17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 KCNA2P16389 499 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 PRPHP41219 470 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 TXKP42681 527 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 SP2Q02086 613 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 TMEM63BQ5T3F8 832 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 MFSD14CQ5VZR4 134 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 KCNG4Q8TDN1 519 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 PXYLP1Q8TE99 480 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 SLC5A5Q92911 643 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 CDHR1Q96JP9 859 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 FAM20AQ96MK3 541 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 FBXO2Q9UK22 296 aaPredicted RBP17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 RBM47A0AV96 593 aaKnown RBP17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 DHX15O43143 795 aaKnown RBP17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 MARCH6O60337 910 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 PPP6R2O75170 966 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 ADCYAP1R1P41586 468 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 GRIN1Q05586 938 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 ARL6IP4Q66PJ3 421 aaKnown RBP17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 CCDC62Q6P9F0 684 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 SCFD2Q8WU76 684 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 BCAS3Q9H6U6 928 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 PTPN22Q9Y2R2 807 aa17.87■□□□□ 0.45
CCDC90B-201ENST00000260054 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 PSMD10O75832 226 aa17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 HMGCRP04035 888 aa17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 TGFB3P10600 412 aa17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 CYBAP13498 195 aa17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 UBA1P22314 1058 aaKnown RBP17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 LY6KQ17RY6 165 aa17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 KCNV1Q6PIU1 500 aa17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 SLFN12Q8IYM2 578 aa17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 TRPV1Q8NER1 839 aa17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 GBP4Q96PP9 640 aa17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 TTC12Q9H892 705 aaPredicted RBP17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 DDX41Q9UJV9 622 aaKnown RBP17.86■□□□□ 0.45
CCDC90B-201ENST00000260054 VWA3AA6NCI4 1184 aa17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 TXNP10599 105 aaKnown RBP17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 ME1P48163 572 aa17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 CACNB2Q08289 660 aaPredicted RBP17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 TTLL4Q14679 1199 aa17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 CCDC144BQ3MJ40 725 aa17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 LRCH2Q5VUJ6 765 aa17.85■□□□□ 0.45
CCDC90B-201ENST00000260054 DTHD1Q6ZMT9 781 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms