RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
ACTN4-201ENST00000252699 MICALL2Q8IY33 904 aa18.71■□□□□ 0.59
ACTN4-201ENST00000252699 SLC17A8Q8NDX2 589 aa18.71■□□□□ 0.59
ACTN4-201ENST00000252699 SLC16A10Q8TF71 515 aa18.71■□□□□ 0.59
ACTN4-201ENST00000252699 POLLQ9UGP5 575 aa18.71■□□□□ 0.59
ACTN4-201ENST00000252699 SNRNP48Q6IEG0 339 aaKnown RBP18.7■□□□□ 0.58
ACTN4-201ENST00000252699 RSBN1LQ6PCB5 846 aaPredicted RBP18.7■□□□□ 0.58
ACTN4-201ENST00000252699 MYRIPQ8NFW9 859 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 ACCSQ96QU6 501 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 CNOT7Q9UIV1 285 aaKnown RBP18.7■□□□□ 0.58
ACTN4-201ENST00000252699 PPP4CP60510 307 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 ELF2Q15723 593 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 MTERF2Q49AM1 385 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 PDXDC2PQ6P474 469 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 RNF146Q9NTX7 359 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 FAM184BQ9ULE4 1060 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 TDP2O95551 362 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 DDIT3P35638 169 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 SHC4Q6S5L8 630 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 PIGOQ8TEQ8 1089 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 TRIM58Q8NG06 486 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 FAM20AQ96MK3 541 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 JPH2Q9BR39 696 aaPredicted RBP18.7■□□□□ 0.58
ACTN4-201ENST00000252699 TSKSQ9UJT2 592 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 SAR1BQ9Y6B6 198 aa18.7■□□□□ 0.58
ACTN4-201ENST00000252699 TLDC2A0PJX2 215 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 P4HA1P13674 534 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 RBL2Q08999 1139 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 PP2D1A8MPX8 630 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 INO80B-WBP1J3KQ70 363 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 TMEM191BP0C7N4 346 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 ANKRD13CQ8N6S4 541 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 INO80BQ9C086 356 aaPredicted RBP18.69■□□□□ 0.58
ACTN4-201ENST00000252699 A0A1W2PRG0 241 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 TNNC2P02585 160 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 H2AFZP0C0S5 128 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 U2AF2P26368 475 aaKnown RBP eCLIP18.69■□□□□ 0.58
ACTN4-201ENST00000252699 MTMR1Q13613 665 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 KIF22Q14807 665 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 TAF12Q16514 161 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 CFAP58Q5T655 872 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 H2AFVQ71UI9 128 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 HACE1Q8IYU2 909 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 ABCB11O95342 1321 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 NDUFB10O96000 172 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 PSAPP07602 524 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 SNX16P57768 344 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 YWHAEP62258 255 aaKnown RBP18.69■□□□□ 0.58
ACTN4-201ENST00000252699 CFAP221Q4G0U5 840 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 PCIF1Q9H4Z3 704 aa18.69■□□□□ 0.58
ACTN4-201ENST00000252699 ZNF70Q9UC06 446 aaPredicted RBP18.69■□□□□ 0.58
ACTN4-201ENST00000252699 FAM205CA6NFA0 338 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 PSMD14O00487 310 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 FDPSP14324 419 aaKnown RBP18.68■□□□□ 0.58
ACTN4-201ENST00000252699 ATP2C1P98194 919 aaPredicted RBP18.68■□□□□ 0.58
ACTN4-201ENST00000252699 RETREG2Q8NC44 543 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 AFPP02771 609 aaKnown RBP18.68■□□□□ 0.58
ACTN4-201ENST00000252699 ORC2Q13416 577 aaPredicted RBP18.68■□□□□ 0.58
ACTN4-201ENST00000252699 UNC13DQ70J99 1090 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 TMEM206Q9H813 350 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 ANAPC4Q9UJX5 808 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 MYL7Q01449 175 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 TFDP1Q14186 410 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 KLHL7Q8IXQ5 586 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 THAP9Q9H5L6 903 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.68■□□□□ 0.58
ACTN4-201ENST00000252699 TRERF1Q96PN7 1200 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 PHF20Q9BVI0 1012 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 SERPINA10Q9UK55 444 aa18.68■□□□□ 0.58
ACTN4-201ENST00000252699 ZHX1Q9UKY1 873 aaPredicted RBP18.68■□□□□ 0.58
ACTN4-201ENST00000252699 SFI1A8K8P3 1242 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 CTDNEP1O95476 244 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 RNF169Q8NCN4 708 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 NYAP2Q9P242 653 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 FBXO40Q9UH90 709 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 PNMA3Q9UL41 463 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 LRRC63Q05C16 580 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 VSTM4Q8IW00 320 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 ST7Q9NRC1 585 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.67■□□□□ 0.58
ACTN4-201ENST00000252699 SMIM23A6NLE4 172 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 E9PMD0 336 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 SRGNP10124 158 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 HDXQ7Z353 690 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 KCNB2Q92953 911 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 RIOK1Q9BRS2 568 aaKnown RBP18.67■□□□□ 0.58
ACTN4-201ENST00000252699 TRIM31Q9BZY9 425 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 FAM151AQ8WW52 585 aa18.67■□□□□ 0.58
ACTN4-201ENST00000252699 BUB1O43683 1085 aa18.66■□□□□ 0.58
ACTN4-201ENST00000252699 ZNF365Q70YC5 407 aa18.66■□□□□ 0.58
ACTN4-201ENST00000252699 AMFRQ9UKV5 643 aa18.66■□□□□ 0.58
ACTN4-201ENST00000252699 POTEB3A0JP26 581 aa18.66■□□□□ 0.58
ACTN4-201ENST00000252699 POTECB2RU33 542 aa18.66■□□□□ 0.58
ACTN4-201ENST00000252699 POTEBQ6S5H4 581 aa18.66■□□□□ 0.58
ACTN4-201ENST00000252699 LRRC45Q96CN5 670 aa18.66■□□□□ 0.58
ACTN4-201ENST00000252699 HPS5Q9UPZ3 1129 aa18.66■□□□□ 0.58
ACTN4-201ENST00000252699 HOXA7P31268 230 aaPredicted RBP18.66■□□□□ 0.58
ACTN4-201ENST00000252699 KRT31Q15323 416 aa18.66■□□□□ 0.58
ACTN4-201ENST00000252699 DAAM2Q86T65 1068 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms