RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 SESTD1Q86VW0 696 aa8.04□□□□□ -1.12
MED28-201ENST00000237380 DDX56Q9NY93 547 aaKnown RBP8.04□□□□□ -1.12
MED28-201ENST00000237380 PCDHB4Q9Y5E5 795 aa8.04□□□□□ -1.12
MED28-201ENST00000237380 ZNF532Q9HCE3 1301 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 PSMD2Q13200 908 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.03□□□□□ -1.12
MED28-201ENST00000237380 NXNQ6DKJ4 435 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 STX19Q8N4C7 294 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 MCPH1Q8NEM0 835 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 GCOM2Q9BZD3 368 aaPredicted RBP8.03□□□□□ -1.12
MED28-201ENST00000237380 LOC102724428A0A0B4J2F2 783 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 AP3M2P53677 418 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 SIK1P57059 783 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 CCDC186Q7Z3E2 898 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 STKLD1Q8NE28 680 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 TSTA3Q13630 321 aaPredicted RBP8.03□□□□□ -1.12
MED28-201ENST00000237380 SLC10A5Q5PT55 438 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 IRAK1BP1Q5VVH5 260 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 ARHGEF25Q86VW2 580 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 ARL8AQ96BM9 186 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 COPRSQ9NQ92 184 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 DACT1Q9NYF0 836 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 HECW2Q9P2P5 1572 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 USP19O94966 1318 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 SOX5P35711 763 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 BCAMP50895 628 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 MTA1Q13330 715 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 ARHGAP15Q53QZ3 475 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 FBXL13Q8NEE6 735 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 NEK9Q8TD19 979 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 ZHX1Q9UKY1 873 aaPredicted RBP8.03□□□□□ -1.12
MED28-201ENST00000237380 DAAM1Q9Y4D1 1078 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 NPHP4O75161 1426 aaPredicted RBP8.03□□□□□ -1.12
MED28-201ENST00000237380 SSH2Q76I76 1423 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 MEIS3Q99687 375 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 CLSTN2Q9H4D0 955 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 A0A1B0GUA9 196 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 MYO1FO00160 1098 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 MYL3P08590 195 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 HSPD1P10809 573 aaKnown RBP8.03□□□□□ -1.12
MED28-201ENST00000237380 FCER1AP12319 257 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 HSPA2P54652 639 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 VSIG1Q86XK7 387 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 GNGT2O14610 69 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 APBA1Q02410 837 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 BTBD8Q5XKL5 378 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 PPP1R13BQ96KQ4 1090 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 EPAS1Q99814 870 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 FLT1P17948 1338 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 KIAA0232Q92628 1395 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 UBXN8O00124 270 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 EYA1Q99502 592 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 SPATA16Q9BXB7 569 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 NPM3O75607 178 aaKnown RBP8.03□□□□□ -1.12
MED28-201ENST00000237380 BTDP43251 543 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 MAP3K10Q02779 954 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 PTPAQ15257 358 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 TOGARAM2Q6ZUX3 1019 aa8.03□□□□□ -1.12
MED28-201ENST00000237380 USP13Q92995 863 aaPredicted RBP8.03□□□□□ -1.12
MED28-201ENST00000237380 OXCT2Q9BYC2 517 aaPredicted RBP8.03□□□□□ -1.12
MED28-201ENST00000237380 KLRF2D3W0D1 207 aa8.02□□□□□ -1.12
MED28-201ENST00000237380 RCSD1Q6JBY9 416 aa8.02□□□□□ -1.12
MED28-201ENST00000237380 CTAGE3PQ8IX95 158 aa8.02□□□□□ -1.12
MED28-201ENST00000237380 GDAP1Q8TB36 358 aa8.02□□□□□ -1.12
MED28-201ENST00000237380 TRMT44Q8IYL2 757 aaKnown RBP8.02□□□□□ -1.13
MED28-201ENST00000237380 DCAF4Q8WV16 495 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 NELFBQ8WX92 580 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 SERPINI1Q99574 410 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 PALD1Q9ULE6 856 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 PSMA4P25789 261 aaKnown RBP8.02□□□□□ -1.13
MED28-201ENST00000237380 IFT43Q96FT9 208 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.02□□□□□ -1.139e-12■■□□□ 14.1
MED28-201ENST00000237380 GPR108Q9NPR9 543 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 GSTA4O15217 222 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 ATF2P15336 505 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 TMEM179Q6ZVK1 233 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 KIAA0825Q8IV33 1275 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 SNX19Q92543 992 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 GBP5Q96PP8 586 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 SERPINB13Q9UIV8 391 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 SCINQ9Y6U3 715 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 PSMD3O43242 534 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 HUS1O60921 280 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 CPP00450 1065 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 SERPINB2P05120 415 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 ZBTB17Q13105 803 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 SEMA3FQ13275 785 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 TTC30AQ86WT1 665 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 MTRQ99707 1265 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 DCDC2CA8MYV0 355 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 PI4K2BG5E9Z4 385 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 USP17L8P0C7I0 530 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 SFNP31947 248 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 LONRF2Q1L5Z9 754 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 PI4K2BQ8TCG2 481 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 GINM1Q9NU53 330 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 IPPQ9Y573 584 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 APOA4P06727 396 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 UBE3CQ15386 1083 aa8.02□□□□□ -1.13
MED28-201ENST00000237380 RNF207Q6ZRF8 634 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms