RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 TXNP10599 105 aaKnown RBP11.54□□□□□ -0.56
HMGCL-201ENST00000235958 CYBAP13498 195 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 GCFC2P16383 781 aaKnown RBP11.54□□□□□ -0.56
HMGCL-201ENST00000235958 CCND3P30281 292 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-201ENST00000235958 MCM7P33993 719 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 ADCYAP1R1P41586 468 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 SP2Q02086 613 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 TNFAIP2Q03169 654 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 SEMA3FQ13275 785 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 MTMR1Q13613 665 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 NBR1Q14596 966 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 LY6KQ17RY6 165 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 FOXD4L6Q3SYB3 417 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-201ENST00000235958 GNPTABQ3T906 1256 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 Q4G0T1 1027 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 TTC38Q5R3I4 469 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 KCNV1Q6PIU1 500 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 FOXD4L3Q6VB84 417 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-201ENST00000235958 LENG9Q96B70 501 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 CDHR1Q96JP9 859 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 NAP1L4Q99733 375 aaKnown RBP11.54□□□□□ -0.56
HMGCL-201ENST00000235958 BCAS3Q9H6U6 928 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 HMX1Q9NP08 348 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-201ENST00000235958 DDX25Q9UHL0 483 aaKnown RBP11.54□□□□□ -0.56
HMGCL-201ENST00000235958 FAM184BQ9ULE4 1060 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 MRVI1Q9Y6F6 885 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 TCHHQ07283 1943 aa11.54□□□□□ -0.56
HMGCL-201ENST00000235958 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.53□□□□□ -0.56
HMGCL-201ENST00000235958 IPO5O00410 1097 aaKnown RBP11.53□□□□□ -0.56
HMGCL-201ENST00000235958 MSH4O15457 936 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 SEPT4O43236 478 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 FIBPO43427 364 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 SLC37A4O43826 429 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 ARIH2O95376 493 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 MYCP01106 439 aaPredicted RBP11.53□□□□□ -0.56
HMGCL-201ENST00000235958 SMPD1P17405 629 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 TTLL4Q14679 1199 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 MTFR1Q15390 333 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 COL13A1Q5TAT6 717 aaPredicted RBP11.53□□□□□ -0.56
HMGCL-201ENST00000235958 C4orf32Q8N8J7 132 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 MCOLN1Q9GZU1 580 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 AGO4Q9HCK5 861 aaKnown RBP11.53□□□□□ -0.56
HMGCL-201ENST00000235958 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.53□□□□□ -0.56
HMGCL-201ENST00000235958 CHMP5Q9NZZ3 219 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 CLIC4Q9Y696 253 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 CENPFP49454 3210 aa11.53□□□□□ -0.56
HMGCL-201ENST00000235958 DHX15O43143 795 aaKnown RBP11.52□□□□□ -0.57
HMGCL-201ENST00000235958 DYNC1LI2O43237 492 aaPredicted RBP11.52□□□□□ -0.57
HMGCL-201ENST00000235958 ADCY6O43306 1168 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 MARCH6O60337 910 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 PTGS1P23219 599 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 CEBPZQ03701 1054 aaKnown RBP11.52□□□□□ -0.57
HMGCL-201ENST00000235958 PTGDRQ13258 359 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 DUSP28Q4G0W2 176 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 GJC2Q5T442 439 aaPredicted RBP11.52□□□□□ -0.57
HMGCL-201ENST00000235958 ANO1Q5XXA6 986 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 HAS1Q92839 578 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 COPS5Q92905 334 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 GJA10Q969M2 543 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 ARMC5Q96C12 935 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 FAM20AQ96MK3 541 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 MTMR9Q96QG7 549 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 SENP7Q9BQF6 1050 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 ZNF577Q9BSK1 485 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 UNC93B1Q9H1C4 597 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 TMEM60Q9H2L4 133 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 PKD2L1Q9P0L9 805 aa11.52□□□□□ -0.57
HMGCL-201ENST00000235958 KIAA0100Q14667 2235 aaKnown RBP11.52□□□□□ -0.57
HMGCL-201ENST00000235958 HTTP42858 3142 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 SORBS3O60504 671 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 NEMFO60524 1076 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 DUSP11O75319 330 aaKnown RBP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 BAG4O95429 457 aaKnown RBP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 CCL5P13501 91 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 AKR1A1P14550 325 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 KCNA2P16389 499 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 SETQ01105 290 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 DNM1Q05193 864 aaKnown RBP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 ITGB3BPQ13352 177 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 ORC2Q13416 577 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 NEDD9Q14511 834 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 SF3A1Q15459 793 aaKnown RBP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 CELF3Q5SZQ8 465 aaKnown RBP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 LHX8Q68G74 356 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 CYFIP1Q7L576 1253 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 POTEDQ86YR6 584 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 DHX37Q8IY37 1157 aaKnown RBP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 GIMAP8Q8ND71 665 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 ETNPPLQ8TBG4 499 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 SLC5A5Q92911 643 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 CHAMP1Q96JM3 812 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 ZNF396Q96N95 335 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 USP28Q96RU2 1077 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 FTOQ9C0B1 505 aaKnown RBP eCLIP11.51□□□□□ -0.57
HMGCL-201ENST00000235958 RNF208Q9H0X6 261 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 KCNMB3Q9NPA1 279 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 TBC1D22BQ9NU19 505 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 PCDHA12Q9UN75 941 aa11.51□□□□□ -0.57
HMGCL-201ENST00000235958 GNEQ9Y223 722 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms