RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 PLXNA1Q9UIW2 1896 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.67□□□□□ -1.98
PRKD3-201ENST00000234179 SCN10AQ9Y5Y9 1956 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 CDK5RAP2Q96SN8 1893 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 GSG1L2A8MUP6 293 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 GPAA1O43292 621 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 MBTPS2O43462 519 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 GFRA3O60609 400 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 CYP2D6P10635 497 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 CTNNB1P35222 781 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 IRS1P35568 1242 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 NBL1P41271 181 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 SLC26A2P50443 739 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 RABGGTBP53611 331 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 CNTN2Q02246 1040 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 ITIH3Q06033 890 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 EPC2Q52LR7 807 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 PLEKHG4Q58EX7 1191 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 RASGRP4Q8TDF6 673 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 ANKS1AQ92625 1134 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 CASP10Q92851 521 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 CLP1Q92989 425 aaKnown RBP2.67□□□□□ -1.98
PRKD3-201ENST00000234179 PBXIP1Q96AQ6 731 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 SCLYQ96I15 445 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 SENP7Q9BQF6 1050 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 AMNQ9BXJ7 453 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 SUGCTQ9HAC7 445 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 STX8Q9UNK0 236 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 GREB1LQ9C091 1923 aaPredicted RBP2.67□□□□□ -1.98
PRKD3-201ENST00000234179 ADGRA3Q8IWK6 1321 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 LOC730098B7Z3J9 87 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 PEX10O60683 326 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 SLURP2P0DP57 97 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 CYP2C9P11712 490 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 CKBP12277 381 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 LAG3P18627 525 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 CCND2P30279 289 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 CLCN5P51795 746 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 CCDC62Q6P9F0 684 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 PPFIBP1Q86W92 1011 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 SECISBP2LQ93073 1101 aaKnown RBP2.67□□□□□ -1.98
PRKD3-201ENST00000234179 LZTS2Q9BRK4 669 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.67□□□□□ -1.98
PRKD3-201ENST00000234179 ANTXR1Q9H6X2 564 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 USTQ9Y2C2 406 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 SSX2IPQ9Y2D8 614 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 PCDHB12Q9Y5F1 795 aa2.67□□□□□ -1.98
PRKD3-201ENST00000234179 NRCAMQ92823 1304 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 TANC1Q9C0D5 1861 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 HOXC8P31273 242 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 GNAQP50148 359 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 ZNF543Q08ER8 600 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 ADAM15Q13444 863 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 PTPN21Q16825 1174 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 IER5Q5VY09 327 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 ATOH1Q92858 354 aaPredicted RBP2.66□□□□□ -1.98
PRKD3-201ENST00000234179 CUL5Q93034 780 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 IER2Q9BTL4 223 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 IFIH1Q9BYX4 1025 aaKnown RBP2.66□□□□□ -1.98
PRKD3-201ENST00000234179 C11orf16Q9NQ32 467 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 TRMT13Q9NUP7 481 aaKnown RBP2.66□□□□□ -1.98
PRKD3-201ENST00000234179 CLDND1Q9NY35 253 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 RIPK3Q9Y572 518 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 MYH8P13535 1937 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 BDP1A6H8Y1 2624 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 KDM3AQ9Y4C1 1321 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 PRR5-ARHGAP8B1AHC4 643 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 NOP56O00567 594 aaKnown RBP2.66□□□□□ -1.98
PRKD3-201ENST00000234179 SNHG28P0DPA3 235 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 SMARCA1P28370 1054 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 NDUFV1P49821 464 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 ARHGAP8P85298 464 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 TFF2Q03403 129 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 ARHGAP1Q07960 439 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 TRIM71Q2Q1W2 868 aaKnown RBP2.66□□□□□ -1.98
PRKD3-201ENST00000234179 TCEAL5Q5H9L2 206 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 KIAA1755Q5JYT7 1200 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 ZMYM1Q5SVZ6 1142 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 ARHGEF16Q5VV41 709 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 CES5AQ6NT32 575 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 TMEM184AQ6ZMB5 413 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 ZBTB33Q86T24 672 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 GDPD5Q8WTR4 605 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 NKD2Q969F2 451 aaPredicted RBP2.66□□□□□ -1.98
PRKD3-201ENST00000234179 MRPL9Q9BYD2 267 aaKnown RBP2.66□□□□□ -1.98
PRKD3-201ENST00000234179 KRT23Q9C075 422 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 HOMER2Q9NSB8 354 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 EXOC6BQ9Y2D4 811 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 SKIP12755 728 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 MTMR3Q13615 1198 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 BTG3Q14201 252 aaPredicted RBP2.66□□□□□ -1.98
PRKD3-201ENST00000234179 PUM1Q14671 1186 aaKnown RBP eCLIP2.66□□□□□ -1.98
PRKD3-201ENST00000234179 CCDC184Q52MB2 194 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 ASTLQ6HA08 431 aaPredicted RBP2.66□□□□□ -1.98
PRKD3-201ENST00000234179 RNF135Q8IUD6 432 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 GPR65Q8IYL9 337 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 ZDHHC14Q8IZN3 488 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 MYOCDQ8IZQ8 938 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 AFG1LQ8WV93 481 aa2.66□□□□□ -1.98
PRKD3-201ENST00000234179 RNF25Q96BH1 459 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms