RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 RABGGTAQ92696 567 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 DBNLQ9UJU6 430 aaKnown RBP12.54□□□□□ -0.4
LAMA4-201ENST00000230538 CLRN2A0PK11 232 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 DYNLL1P63167 89 aaKnown RBP12.53□□□□□ -0.4
LAMA4-201ENST00000230538 TMTC4Q5T4D3 741 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 CCDC197Q8NCU1 140 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 SLC7A3Q8WY07 619 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 CHMP6Q96FZ7 201 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
LAMA4-201ENST00000230538 STAP2Q9UGK3 403 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 MOCS3O95396 460 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 KRT1P04264 644 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 GPR162Q16538 588 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 LEMD3Q9Y2U8 911 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 DAAM1Q9Y4D1 1078 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 SOWAHDA6NJG2 315 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 CCND2P30279 289 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 CRKLP46109 303 aaKnown RBP12.53□□□□□ -0.4
LAMA4-201ENST00000230538 CCT5P48643 541 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 STX1BP61266 288 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.53□□□□□ -0.4
LAMA4-201ENST00000230538 PCIF1Q9H4Z3 704 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 EPB41L5Q9HCM4 733 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 CLIC2O15247 247 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 LRRN2O75325 713 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 XPAP23025 273 aaPredicted RBP12.53□□□□□ -0.4
LAMA4-201ENST00000230538 SH3BGRP55822 239 aaPredicted RBP12.53□□□□□ -0.4
LAMA4-201ENST00000230538 MAN2A1Q16706 1144 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 APOA5Q6Q788 366 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 NOP9Q86U38 636 aaKnown RBP12.53□□□□□ -0.4
LAMA4-201ENST00000230538 ABI1Q8IZP0 508 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 JPH2Q9BR39 696 aaPredicted RBP12.53□□□□□ -0.4
LAMA4-201ENST00000230538 DISP1Q96F81 1524 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 MCF2LO15068 1137 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 EPHB4P54760 987 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 TMED2Q15363 201 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 RSRC2Q7L4I2 434 aaKnown RBP12.53□□□□□ -0.4
LAMA4-201ENST00000230538 TRIM42Q8IWZ5 723 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 CCNYQ8ND76 341 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 COPRSQ9NQ92 184 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
LAMA4-201ENST00000230538 LUC7L3O95232 432 aaKnown RBP12.52□□□□□ -0.4
LAMA4-201ENST00000230538 ECEL1O95672 775 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 OSBPP22059 807 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 INPP1P49441 399 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 TMTC3Q6ZXV5 915 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 RYBPQ8N488 228 aaPredicted RBP12.52□□□□□ -0.4
LAMA4-201ENST00000230538 CACTINQ8WUQ7 758 aaKnown RBP12.52□□□□□ -0.4
LAMA4-201ENST00000230538 FAM81BQ96LP2 452 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 INO80B-WBP1J3KQ70 363 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 PPFIA2O75334 1257 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 GCKP35557 465 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 MSH2P43246 934 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 TBCKQ8TEA7 893 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 ATP6V1E2Q96A05 226 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 INO80BQ9C086 356 aaPredicted RBP12.52□□□□□ -0.4
LAMA4-201ENST00000230538 PPP1R9AQ9ULJ8 1098 aa12.52□□□□□ -0.4
LAMA4-201ENST00000230538 GOLGA8SH3BPF8 625 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 MED7O43513 233 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 EVI5O60447 810 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 USP14P54578 494 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 IQCB1Q15051 598 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 WDR11Q9BZH6 1224 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 TMEM206Q9H813 350 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 GPR108Q9NPR9 543 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 PRAMEF22A3QJZ6 481 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 HEXIM1O94992 359 aaKnown RBP12.52□□□□□ -0.41
LAMA4-201ENST00000230538 ACRBPQ8NEB7 543 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 FAM149B1Q96BN6 582 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 MAGED2Q9UNF1 606 aaPredicted RBP12.52□□□□□ -0.41
LAMA4-201ENST00000230538 MYO5CQ9NQX4 1742 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 MX2P20592 715 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 CXCR5P32302 372 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 SLC16A2P36021 539 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 DYNLT1P63172 113 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 ADCY1Q08828 1119 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 ANKRD20A4Q4UJ75 823 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 ANKRD20A8PQ5CZ79 823 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 ANKRD20A2Q5SQ80 823 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 ANKRD20A1Q5TYW2 823 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 FAM133AQ8N9E0 248 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 ANTXR1Q9H6X2 564 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 WDR17Q8IZU2 1322 aa12.52□□□□□ -0.41
LAMA4-201ENST00000230538 YEATS2Q9ULM3 1422 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 MEIS1O00470 390 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 CYP21A2P08686 494 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 GCFC2P16383 781 aaKnown RBP12.51□□□□□ -0.41
LAMA4-201ENST00000230538 NACC1Q96RE7 527 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 GCNT4Q9P109 453 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 EPS15L1Q9UBC2 864 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 ATP8A1Q9Y2Q0 1164 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 JRKLQ9Y4A0 524 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 PGRMC1O00264 195 aaKnown RBP12.51□□□□□ -0.41
LAMA4-201ENST00000230538 IKBKBO14920 756 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 CCNA1P78396 465 aa12.51□□□□□ -0.41
LAMA4-201ENST00000230538 DARS2Q6PI48 645 aaKnown RBP12.51□□□□□ -0.41
LAMA4-201ENST00000230538 MYLK4Q86YV6 388 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-201ENST00000230538 KCTD6Q8NC69 237 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms