RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ANKS1AQ92625 1134 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 TRIM6Q9C030 488 aaPredicted RBP10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 UBA5Q9GZZ9 404 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 ZNHIT6Q9NWK9 470 aaKnown RBP10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 ARHGAP20Q9P2F6 1191 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 MYH1P12882 1939 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 MAST2Q6P0Q8 1798 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 GOLGA6L7A0A1B0GV03 622 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 MPHOSPH10O00566 681 aaKnown RBP10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 BACH1O14867 736 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 LDHBP07195 334 aaKnown RBP10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 SLC27A3Q5K4L6 730 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 C2CD5Q86YS7 1000 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 ANKRD13CQ8N6S4 541 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 DAGLBQ8NCG7 672 aa10.4□□□□□ -0.74
HLA-DOA-201ENST00000229829 ENO4A6NNW6 628 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 PRPF6O94906 941 aaKnown RBP10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 CDC25CP30307 473 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 TM4SF1P30408 202 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 HPDP32754 393 aaPredicted RBP10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCDC96Q2M329 555 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 IFNLR1Q8IU57 520 aaPredicted RBP10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 TBCKQ8TEA7 893 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCDC42Q96M95 316 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 ZMYND12Q9H0C1 365 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCDC88AQ3V6T2 1871 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 NUTM2BA6NNL0 878 aaPredicted RBP10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 NUTM2EB1AL46 878 aaPredicted RBP10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 AGPSO00116 658 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 IPO7O95373 1038 aaKnown RBP10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 MOCS3O95396 460 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 EZRP15311 586 aaKnown RBP10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 GNAQP50148 359 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 KIF5AQ12840 1032 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 NFIXQ14938 502 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 CREG2Q8IUH2 290 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 PIGSQ96S52 555 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 SETDB2Q96T68 719 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 C7orf25Q9BPX7 421 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 DMGDHQ9UI17 866 aaKnown RBP10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 SALL4Q9UJQ4 1053 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 USP21Q9UK80 565 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 MYMKA6NI61 221 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 KIF4AO95239 1232 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 MYL1P05976 194 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 PRPHP41219 470 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 VAV2P52735 878 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 SLC7A5Q01650 507 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 NONOQ15233 471 aaKnown RBP eCLIP10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 LRRC41Q15345 812 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCNI2Q6ZMN8 369 aaPredicted RBP10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 GJA10Q969M2 543 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 PURBQ96QR8 312 aaKnown RBP10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 UIMC1Q96RL1 719 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 NUDT12Q9BQG2 462 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 NUP58Q9BVL2 599 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 SELENOOQ9BVL4 669 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 BLOC1S4Q9NUP1 217 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 ANKIB1Q9P2G1 1089 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 IRS2Q9Y4H2 1338 aa10.39□□□□□ -0.75
HLA-DOA-201ENST00000229829 TUBBP07437 444 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 MYBL1P10243 752 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 MAP2K1Q02750 393 aaPredicted RBP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 ZSCAN29Q8IWY8 852 aaPredicted RBP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCDC170Q8IYT3 715 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 MIEF2Q96C03 454 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 ERGIC2Q96RQ1 377 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 LRRC1Q9BTT6 524 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 ANKRD2Q9GZV1 360 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 MMRN2Q9H8L6 949 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 A0A1B0GUA9 196 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 BICDL2A1A5D9 508 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 LAD1O00515 517 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 PPP1R12AO14974 1030 aaPredicted RBP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 CHUKO15111 745 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 NCK2O43639 380 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 PDHBP11177 359 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 EIF4A3P38919 411 aaKnown RBP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 GRB10Q13322 594 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 ARMC3Q5W041 872 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCDC70Q6NSX1 233 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 NFRKBQ6P4R8 1299 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 ZNF662Q6ZS27 426 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 NEK8Q86SG6 692 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 PIAS4Q8N2W9 510 aaPredicted RBP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 RRP36Q96EU6 259 aaKnown RBP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 PPANQ9NQ55 473 aaKnown RBP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 CPSF2Q9P2I0 782 aaKnown RBP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 BAIAP2L1Q9UHR4 511 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 POTEMA6NI47 508 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 EDIL3O43854 480 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 AARSP49588 968 aaKnown RBP eCLIP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 SF3B2Q13435 895 aaKnown RBP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 SPA17Q15506 151 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 RETREG2Q8NC44 543 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 ZKSCAN4Q969J2 545 aaPredicted RBP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 AK8Q96MA6 479 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 IFIH1Q9BYX4 1025 aaKnown RBP10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 NDST4Q9H3R1 872 aa10.38□□□□□ -0.75
HLA-DOA-201ENST00000229829 PLAGL2Q9UPG8 496 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms