RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 OPHN1O60890 802 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 PDE8BO95263 885 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 GUCY2FP51841 1108 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 DCAF15Q66K64 600 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 TEX9Q8N6V9 391 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 LRGUKQ96M69 825 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 TRIM6Q9C030 488 aaPredicted RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 KIAA1586Q9HCI6 787 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 GPCPD1Q9NPB8 672 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 BATF3Q9NR55 127 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 GCNT4Q9P109 453 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 PCDHA13Q9Y5I0 950 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 NRXN1Q9ULB1 1477 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 KNDC1Q76NI1 1749 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 RNF8O76064 485 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 CPA1P15085 419 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 PHKG2P15735 406 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 IL6STP40189 918 aaPredicted RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 ZAP70P43403 619 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 DR1Q01658 176 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 TAP1Q03518 808 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 CTDSPL2Q05D32 466 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 AP3B2Q13367 1082 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 ACCSQ96QU6 501 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 BSDC1Q9NW68 430 aaPredicted RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 SEL1LQ9UBV2 794 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 PACSIN2Q9UNF0 486 aaPredicted RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 TNNQ9UQP3 1299 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 XDHP47989 1333 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 ARHGAP42A6NI28 874 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 MYO1FO00160 1098 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 HEXIM1O94992 359 aaKnown RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 CCNE1P24864 410 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 ADD2P35612 726 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 TIMM10P62072 90 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 PABPC4Q13310 644 aaKnown RBP eCLIP4.78□□□□□ -1.64
CHD9-201ENST00000219084 NECTIN1Q15223 517 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 ALX1Q15699 326 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 SLC35F6Q8N357 371 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 TTC13Q8NBP0 860 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 GSDMBQ8TAX9 411 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 DDX27Q96GQ7 796 aaKnown RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 BRIP1Q9BX63 1249 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 DHX36Q9H2U1 1008 aaKnown RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 USP40Q9NVE5 1235 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 LGALS16A8MUM7 142 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 K7ENM7 598 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 M0QZ92 97 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 BFSP1Q12934 665 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 DHX34Q14147 1143 aaKnown RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 PLS1Q14651 629 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 RPS6KA2Q15349 733 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 LRIG3Q6UXM1 1119 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 FAM89AQ96GI7 184 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 NT5C1BQ96P26 610 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 DISC1Q9NRI5 854 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 CLIC4Q9Y696 253 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 MON2Q7Z3U7 1717 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 SPATA31D1Q6ZQQ2 1576 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 TNNI1P19237 187 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 CCT5P48643 541 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 TRIM72Q6ZMU5 477 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 GIMAP8Q8ND71 665 aaPredicted RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 RIOK1Q9BRS2 568 aaKnown RBP4.78□□□□□ -1.64
CHD9-201ENST00000219084 AMNQ9BXJ7 453 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 PARD6BQ9BYG5 372 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 ABHD10Q9NUJ1 306 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 STRIP2Q9ULQ0 834 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 MYH13Q9UKX3 1938 aa4.78□□□□□ -1.64
CHD9-201ENST00000219084 A6NJR5 290 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 KLRF2D3W0D1 207 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 AP3B1O00203 1094 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 SMIM24O75264 130 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 TJP3O95049 919 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 CLTAP09496 248 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 NR2F2P24468 414 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 PIK3CAP42336 1068 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 LIG4P49917 911 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 TFAP4Q01664 338 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 IFT88Q13099 833 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 DPCR1Q3MIW9 517 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 LONRF3Q496Y0 759 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 CASC4Q6P4E1 433 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 CENPUQ71F23 418 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 ENOSF1Q7L5Y1 443 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 DEPTORQ8TB45 409 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 DHX38Q92620 1227 aaKnown RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 EAF2Q96CJ1 260 aaPredicted RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 PPP1R2P1Q96PQ5 205 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 DESI2Q9BSY9 194 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 TIPINQ9BVW5 301 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 BIN2Q9UBW5 565 aaPredicted RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 KCNJ14Q9UNX9 436 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 LTN1O94822 1766 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 SMAPO00193 183 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 CTNND1O60716 968 aaKnown RBP4.77□□□□□ -1.65
CHD9-201ENST00000219084 SGO2Q562F6 1265 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 FSCBQ5H9T9 825 aa4.77□□□□□ -1.65
CHD9-201ENST00000219084 GJC2Q5T442 439 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms