RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 LUC7LQ9NQ29 371 aaKnown RBP14.72□□□□□ -0.05
SRP54-201ENST00000216774 STIM2Q9P246 746 aa14.72□□□□□ -0.05
SRP54-201ENST00000216774 BTAF1O14981 1849 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 PNMA6FA0A0J9YX94 578 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 PPFIA4O75335 1185 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 GNA14O95837 355 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 GCFC2P16383 781 aaKnown RBP14.71□□□□□ -0.05
SRP54-201ENST00000216774 RFC4P35249 363 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 COASYQ13057 564 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 SLC9C1Q4G0N8 1177 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 MFSD14BQ5SR56 506 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 KCNK18Q7Z418 384 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 AMIGO3Q86WK7 504 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 DNAJC19Q96DA6 116 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 NUDT12Q9BQG2 462 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 DMGDHQ9UI17 866 aaKnown RBP14.71□□□□□ -0.05
SRP54-201ENST00000216774 GGA1Q9UJY5 639 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 FOCADQ5VW36 1801 aa14.71□□□□□ -0.05
SRP54-201ENST00000216774 KDM3AQ9Y4C1 1321 aa14.71□□□□□ -0.06
SRP54-201ENST00000216774 IGKV6D-41A0A0C4DH26 115 aa14.71□□□□□ -0.06
SRP54-201ENST00000216774 SLC26A4O43511 780 aa14.71□□□□□ -0.06
SRP54-201ENST00000216774 SERPING1P05155 500 aa14.71□□□□□ -0.06
SRP54-201ENST00000216774 CLK2P49760 499 aaKnown RBP14.71□□□□□ -0.06
SRP54-201ENST00000216774 GFPT1Q06210 699 aaPredicted RBP14.71□□□□□ -0.06
SRP54-201ENST00000216774 KCNMA1Q12791 1236 aa14.71□□□□□ -0.06
SRP54-201ENST00000216774 SF3B2Q13435 895 aaKnown RBP14.71□□□□□ -0.06
SRP54-201ENST00000216774 HYIQ5T013 277 aa14.71□□□□□ -0.06
SRP54-201ENST00000216774 HDAC7Q8WUI4 952 aa14.71□□□□□ -0.06
SRP54-201ENST00000216774 RIN2Q8WYP3 895 aaPredicted RBP14.71□□□□□ -0.06
SRP54-201ENST00000216774 RPGRQ92834 1020 aaKnown RBP14.71□□□□□ -0.06
SRP54-201ENST00000216774 NAP1L4Q99733 375 aaKnown RBP14.71□□□□□ -0.06
SRP54-201ENST00000216774 TLR10Q9BXR5 811 aa14.71□□□□□ -0.06
SRP54-201ENST00000216774 TANGO6Q9C0B7 1094 aa14.71□□□□□ -0.06
SRP54-201ENST00000216774 NT5C3AQ9H0P0 336 aa14.71□□□□□ -0.06
SRP54-201ENST00000216774 BMP2KQ9NSY1 1161 aaPredicted RBP14.71□□□□□ -0.06
SRP54-201ENST00000216774 GOLGA6CA6NDK9 693 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 GOLGA6DP0CG33 693 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 TNNI2P48788 182 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 MARSP56192 900 aaKnown RBP14.7□□□□□ -0.06
SRP54-201ENST00000216774 GABPAQ06546 454 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 EZH2Q15910 746 aaKnown RBP14.7□□□□□ -0.06
SRP54-201ENST00000216774 FAM26FQ5R3K3 315 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 KLHDC7AQ5VTJ3 777 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 SFMBT2Q5VUG0 894 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 SND1Q7KZF4 910 aaKnown RBP eCLIP14.7□□□□□ -0.068e-6■□□□□ 9.2
SRP54-201ENST00000216774 CERKQ8TCT0 537 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 CUL5Q93034 780 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 CAVIN3Q969G5 261 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 MTMR8Q96EF0 704 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 SH3GL2Q99962 352 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 PANK4Q9NVE7 773 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 GOLGA6AQ9NYA3 693 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 DDX25Q9UHL0 483 aaKnown RBP14.7□□□□□ -0.06
SRP54-201ENST00000216774 SALL4Q9UJQ4 1053 aa14.7□□□□□ -0.06
SRP54-201ENST00000216774 GOLGA8KD6RF30 607 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 OPA1O60313 960 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 CLSTN1O94985 981 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 SLC1A4P43007 532 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 RASSF7Q02833 373 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 ZNF543Q08ER8 600 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 NNTQ13423 1086 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 LRRC41Q15345 812 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 CRY2Q49AN0 593 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 CFAP221Q4G0U5 840 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 CCDC40Q4G0X9 1142 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 ALS2CLQ60I27 953 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 HAUS3Q68CZ6 603 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 FOXR1Q6PIV2 292 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 GBP6Q6ZN66 633 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 GLIS3Q8NEA6 775 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 HAS1Q92839 578 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 JMJD4Q9H9V9 463 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 TRAF5O00463 557 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 NOL4O94818 638 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 TTLL1O95922 423 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 EPB41P11171 864 aaKnown RBP14.69□□□□□ -0.06
SRP54-201ENST00000216774 MRPL12P52815 198 aaKnown RBP14.69□□□□□ -0.06
SRP54-201ENST00000216774 PPFIA1Q13136 1202 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 TDRD12Q587J7 1177 aaKnown RBP14.69□□□□□ -0.06
SRP54-201ENST00000216774 FAM83BQ5T0W9 1011 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 TRAPPC3LQ5T215 181 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 LRRC47Q8N1G4 583 aaKnown RBP14.69□□□□□ -0.06
SRP54-201ENST00000216774 SWAP70Q9UH65 585 aa14.69□□□□□ -0.06
SRP54-201ENST00000216774 MYO3BQ8WXR4 1341 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 CXCR5P32302 372 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 VPS72Q15906 364 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 ECM1Q16610 540 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 C8orf74Q6P047 294 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 CCDC65Q8IXS2 484 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 C10orf67Q8IYJ2 551 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 ADGRF4Q8IZF3 695 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 PODXL2Q9NZ53 605 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 ATP6V0A2Q9Y487 856 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 TLR2O60603 784 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 ATP2B2Q01814 1243 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 NAB2Q15742 525 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 TRIM59Q8IWR1 403 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 GPCPD1Q9NPB8 672 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 RSPH14Q9UHP6 348 aa14.68□□□□□ -0.06
SRP54-201ENST00000216774 PCDHA12Q9UN75 941 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms