RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 CUEDC2Q9H467 287 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 TPX2Q9ULW0 747 aaKnown RBP11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 FRMPD2Q68DX3 1309 aaPredicted RBP11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 OR52Z1P0C646 297 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 AFMP43652 599 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 ADCY7P51828 1080 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 UBASH3AP57075 661 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 CCZ1BP86790 482 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 CCZ1P86791 482 aaPredicted RBP11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 CUL4BQ13620 913 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 CCDC93Q567U6 631 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 DNTTIP2Q5QJE6 756 aaKnown RBP11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 ZFPM1Q8IX07 1006 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 RTKN2Q8IZC4 609 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 RGL4Q8IZJ4 473 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 C17orf53Q8N3J3 647 aaPredicted RBP11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 RMND1Q9NWS8 449 aa11.89□□□□□ -0.51
APOBEC3D-201ENST00000216099 ATP1A3P13637 1013 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 CLDN10P78369 228 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 FMR1Q06787 632 aaKnown RBP eCLIP11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 DALRD3Q5D0E6 543 aaKnown RBP11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 SH3BP5LQ7L8J4 393 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 TMC6Q7Z403 805 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 PAGR1Q9BTK6 254 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 JMJD4Q9H9V9 463 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 PTPRHQ9HD43 1115 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 RIC8AQ9NPQ8 531 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 DISC1Q9NRI5 854 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 SYNPO2Q9UMS6 1093 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 ATAD5Q96QE3 1844 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 PPIP5K2O43314 1243 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 SERPINC1P01008 464 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 STAT6P42226 847 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 CERKLQ49MI3 558 aaPredicted RBP11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 SPATA1Q5VX52 437 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 TMEM179Q6ZVK1 233 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 ADGRF4Q8IZF3 695 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 SLC16A10Q8TF71 515 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 GLT8D2Q9H1C3 349 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 VAT1LQ9HCJ6 419 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 KIAA1024Q9UPX6 916 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 NFE2L3Q9Y4A8 694 aa11.88□□□□□ -0.51
APOBEC3D-201ENST00000216099 DDTLA6NHG4 134 aaPredicted RBP11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 YDJCA8MPS7 323 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 MPHOSPH10O00566 681 aaKnown RBP11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 C21orf2O43822 256 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 CD53P19397 219 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 RBM5P52756 815 aaKnown RBP eCLIP11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 VSTM4Q8IW00 320 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 TTLL6Q8N841 843 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 CEP120Q8N960 986 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 MYRIPQ8NFW9 859 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 C12orf49Q9H741 205 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 SYNRGQ9UMZ2 1314 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 EIF6P56537 245 aaKnown RBP11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 CFAP100Q494V2 611 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 CLEC10AQ8IUN9 316 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 GMCL1P1Q8NEA9 526 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 MED15Q96RN5 788 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 PCDHAC2Q9Y5I4 1007 aa11.87□□□□□ -0.51
APOBEC3D-201ENST00000216099 COL4A5P29400 1685 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 HMGB1P1B2RPK0 211 aaPredicted RBP11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 ZBTB5O15062 677 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 SKILP12757 684 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 UBA7P41226 1012 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 BAG6P46379 1132 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 KCNB1Q14721 858 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 CCDC96Q2M329 555 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 RRAGBQ5VZM2 374 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 SDR16C5Q8N3Y7 309 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 TBCKQ8TEA7 893 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 DPF2Q92785 391 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 ARMC5Q96C12 935 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 SRPK1Q96SB4 655 aaKnown RBP11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 MTRQ99707 1265 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 SENP7Q9BQF6 1050 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 LRRC27Q9C0I9 530 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 TTC36A6NLP5 189 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 NRDCO43847 1150 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 SORBS3O60504 671 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 CCNT1O60563 726 aaKnown RBP11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 CBX1P83916 185 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 TCP10Q12799 353 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 ARID5BQ14865 1188 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 LETM2Q2VYF4 491 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 ZNF658Q5TYW1 1059 aaPredicted RBP11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 ARMCX5Q6P1M9 558 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 PADI6Q6TGC4 694 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 C14orf80Q86SX3 495 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 CCDC112Q8NEF3 446 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 NAP1L4Q99733 375 aaKnown RBP11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 KBTBD4Q9NVX7 518 aa11.86□□□□□ -0.51
APOBEC3D-201ENST00000216099 ENPP3O14638 875 aa11.85□□□□□ -0.51
APOBEC3D-201ENST00000216099 PPP1R11O60927 126 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3D-201ENST00000216099 RPN1P04843 607 aaKnown RBP11.85□□□□□ -0.51
APOBEC3D-201ENST00000216099 VIL1P09327 827 aaKnown RBP11.85□□□□□ -0.51
APOBEC3D-201ENST00000216099 EEF2P13639 858 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms