RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 USP17L22D6RA61 530 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 USP17L17D6RBQ6 530 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 USP17L19D6RCP7 530 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 USP17L20D6RJB6 530 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 USP17L24Q0WX57 530 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 USP17L6PQ6QN14 398 aa20.54■□□□□ 0.88
MBD3-201ENST00000156825 MAGOHBQ96A72 148 aaKnown RBP20.54■□□□□ 0.88
MBD3-201ENST00000156825 POTEMA6NI47 508 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 CD58P19256 250 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 H7C0C1 242 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 IKBKBO14920 756 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 ATP5OP48047 213 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 SCARF1Q14162 830 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 NAA25Q14CX7 972 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 FAM193BQ96PV7 902 aaPredicted RBP20.53■□□□□ 0.88
MBD3-201ENST00000156825 MAGEF1Q9HAY2 307 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 GCNT4Q9P109 453 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 MAGED2Q9UNF1 606 aaPredicted RBP20.53■□□□□ 0.88
MBD3-201ENST00000156825 MFAP3P55082 362 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 ATP11AP98196 1134 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 SUPT20HL1Q3ZLR7 823 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 CCDC13Q8IYE1 715 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 TTLL6Q8N841 843 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 COA1Q9GZY4 146 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 CIAPIN1Q6FI81 312 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 CCDC62Q6P9F0 684 aa20.53■□□□□ 0.88
MBD3-201ENST00000156825 CLEC4GQ6UXB4 293 aa20.52■□□□□ 0.88
MBD3-201ENST00000156825 PTCH1Q13635 1447 aa20.52■□□□□ 0.88
MBD3-201ENST00000156825 SRGAP2CP0DJJ0 459 aa20.52■□□□□ 0.88
MBD3-201ENST00000156825 POLR2BP30876 1174 aaKnown RBP20.52■□□□□ 0.88
MBD3-201ENST00000156825 MRPS25P82663 173 aaKnown RBP20.52■□□□□ 0.88
MBD3-201ENST00000156825 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.52■□□□□ 0.88
MBD3-201ENST00000156825 TMEM47Q9BQJ4 181 aa20.52■□□□□ 0.88
MBD3-201ENST00000156825 UBE2TQ9NPD8 197 aaPredicted RBP20.52■□□□□ 0.88
MBD3-201ENST00000156825 CDC23Q9UJX2 597 aa20.52■□□□□ 0.88
MBD3-201ENST00000156825 STK38LQ9Y2H1 464 aa20.52■□□□□ 0.88
MBD3-201ENST00000156825 PSDA5PKW4 1024 aaPredicted RBP20.52■□□□□ 0.88
MBD3-201ENST00000156825 ZNF772Q68DY9 489 aaPredicted RBP20.52■□□□□ 0.88
MBD3-201ENST00000156825 C4orf50Q6ZRC1 276 aa20.52■□□□□ 0.88
MBD3-201ENST00000156825 PDE11AQ9HCR9 933 aa20.52■□□□□ 0.88
MBD3-201ENST00000156825 SPDYE16A6NNV3 312 aaPredicted RBP20.52■□□□□ 0.88
MBD3-201ENST00000156825 SPDYE2Q495Y8 402 aa20.52■□□□□ 0.88
MBD3-201ENST00000156825 RPS6KC1Q96S38 1066 aa20.52■□□□□ 0.88
MBD3-201ENST00000156825 PNMA6FA0A0J9YX94 578 aa20.52■□□□□ 0.87
MBD3-201ENST00000156825 CHGBP05060 677 aa20.52■□□□□ 0.87
MBD3-201ENST00000156825 ACCSQ96QU6 501 aa20.52■□□□□ 0.87
MBD3-201ENST00000156825 CD209Q9NNX6 404 aa20.52■□□□□ 0.87
MBD3-201ENST00000156825 MOCS3O95396 460 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 PCK1P35558 622 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 EIF4A3P38919 411 aaKnown RBP20.51■□□□□ 0.87
MBD3-201ENST00000156825 USP14P54578 494 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 DYNLT1P63172 113 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 PDXDC2PQ6P474 469 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 ARHGEF1Q92888 912 aaKnown RBP20.51■□□□□ 0.87
MBD3-201ENST00000156825 TMTC3Q6ZXV5 915 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 POC1B-GALNT4F8VUJ3 575 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 CUL4BQ13620 913 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 PARVGQ9HBI0 331 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 PLCB1Q9NQ66 1216 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 CYP19A1P11511 503 aaPredicted RBP20.51■□□□□ 0.87
MBD3-201ENST00000156825 ATF2P15336 505 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 CCNE1P24864 410 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 CRKP46108 304 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 IFNAR2P48551 515 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 SEPT2Q15019 361 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 DALRD3Q5D0E6 543 aaKnown RBP20.51■□□□□ 0.87
MBD3-201ENST00000156825 CROCCP2Q86T23 111 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 GABPB2Q8TAK5 448 aaPredicted RBP20.51■□□□□ 0.87
MBD3-201ENST00000156825 STK17AQ9UEE5 414 aa20.51■□□□□ 0.87
MBD3-201ENST00000156825 SCARA5Q6ZMJ2 495 aa20.5■□□□□ 0.87
MBD3-201ENST00000156825 NARFQ9UHQ1 456 aa20.5■□□□□ 0.87
MBD3-201ENST00000156825 NBPF26B4DH59 902 aa20.5■□□□□ 0.87
MBD3-201ENST00000156825 TLR3O15455 904 aaKnown RBP20.5■□□□□ 0.87
MBD3-201ENST00000156825 NBPF10Q6P3W6 841 aaKnown RBP20.5■□□□□ 0.87
MBD3-201ENST00000156825 NBPF15Q8N660 670 aa20.5■□□□□ 0.87
MBD3-201ENST00000156825 ENOX1Q8TC92 643 aaKnown RBP20.5■□□□□ 0.87
MBD3-201ENST00000156825 MASTLQ96GX5 879 aa20.5■□□□□ 0.87
MBD3-201ENST00000156825 KIF1BO60333 1816 aa20.5■□□□□ 0.87
MBD3-201ENST00000156825 DGKHQ86XP1 1220 aa20.5■□□□□ 0.87
MBD3-201ENST00000156825 ENAHQ8N8S7 591 aaPredicted RBP20.5■□□□□ 0.87
MBD3-201ENST00000156825 PPP2R5AQ15172 486 aa20.5■□□□□ 0.87
MBD3-201ENST00000156825 BAIAP2L1Q9UHR4 511 aa20.5■□□□□ 0.87
MBD3-201ENST00000156825 RIPOR2Q9Y4F9 1068 aa20.5■□□□□ 0.87
MBD3-201ENST00000156825 MAP3K4Q9Y6R4 1608 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 FAM83BQ5T0W9 1011 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 GSDMBQ8TAX9 411 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 NLRP4Q96MN2 994 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 ADD3Q9UEY8 706 aaKnown RBP20.49■□□□□ 0.87
MBD3-201ENST00000156825 GAP43P17677 238 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 MAPK4P31152 587 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 CCNA1P78396 465 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 KIF22Q14807 665 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 ATP2A3Q93084 1043 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 DCP1AQ9NPI6 582 aaPredicted RBP20.49■□□□□ 0.87
MBD3-201ENST00000156825 TRIM49BA6NDI0 452 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 CDC27P30260 824 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 TFDP1Q14186 410 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 BRIP1Q9BX63 1249 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 EPB41L5Q9HCM4 733 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 ZBTB7AO95365 584 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms