RNA–Protein interactions for RNA: ENST00000053867.7

GRN-201, Transcript of granulin precursor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRN, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-201ENST00000053867 FGFBP2Q9BYJ0 223 aa17.11■□□□□ 0.33
GRN-201ENST00000053867 VPS16Q9H269 839 aa17.11■□□□□ 0.33
GRN-201ENST00000053867 TMX1Q9H3N1 280 aa17.11■□□□□ 0.33
GRN-201ENST00000053867 SEMA6BQ9H3T3 888 aa17.11■□□□□ 0.33
GRN-201ENST00000053867 TAB2Q9NYJ8 693 aa17.11■□□□□ 0.33
GRN-201ENST00000053867 LIMA1Q9UHB6 759 aaKnown RBP17.11■□□□□ 0.33
GRN-201ENST00000053867 ABCB11O95342 1321 aa17.11■□□□□ 0.33
GRN-201ENST00000053867 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
GRN-201ENST00000053867 E4F1Q66K89 784 aaPredicted RBP17.1■□□□□ 0.33
GRN-201ENST00000053867 APOBEC3FQ8IUX4 373 aaKnown RBP17.1■□□□□ 0.33
GRN-201ENST00000053867 TC2NQ8N9U0 490 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 HOMER2Q9NSB8 354 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 TRMT1Q9NXH9 659 aaKnown RBP17.1■□□□□ 0.33
GRN-201ENST00000053867 POLR2AP24928 1970 aaKnown RBP17.1■□□□□ 0.33
GRN-201ENST00000053867 KCNJ18B7U540 433 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 ARP10275 920 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 IDEP14735 1019 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 YBX3P16989 372 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■■□□□ 12.7
GRN-201ENST00000053867 HSD17B4P51659 736 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 BACE1P56817 501 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 KCNJ12Q14500 433 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 ARSHQ5FYA8 562 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 DNTTIP2Q5QJE6 756 aaKnown RBP17.1■□□□□ 0.33
GRN-201ENST00000053867 DCAF15Q66K64 600 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 IL31RAQ8NI17 732 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 FAM20AQ96MK3 541 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 RGL1Q9NZL6 768 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 PPP1R9AQ9ULJ8 1098 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 ZHX2Q9Y6X8 837 aa17.1■□□□□ 0.33
GRN-201ENST00000053867 PVALEFA0A1B0GWK0 134 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 SSBP05455 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
GRN-201ENST00000053867 PLA2G4BP0C869 781 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 ALAS1P13196 640 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 CYP4A11Q02928 519 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 RAD51AP2Q09MP3 1159 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 LRRC41Q15345 812 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 CNNM4Q6P4Q7 775 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 PURBQ96QR8 312 aaKnown RBP17.09■□□□□ 0.33
GRN-201ENST00000053867 GINM1Q9NU53 330 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 RIPK3Q9Y572 518 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 DICER1Q9UPY3 1922 aaKnown RBP17.09■□□□□ 0.33
GRN-201ENST00000053867 PSMA7O14818 248 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 CYP11B2P19099 503 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 CCNE1P24864 410 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 COPB1P53618 953 aaKnown RBP17.09■□□□□ 0.33
GRN-201ENST00000053867 SLC12A3P55017 1021 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 TRAF1Q13077 416 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 OTOP1Q7RTM1 612 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 ZNF280CQ8ND82 737 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 P2RX5Q93086 422 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 ATG4CQ96DT6 458 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 DHTKD1Q96HY7 919 aaPredicted RBP17.09■□□□□ 0.33
GRN-201ENST00000053867 C16orf45Q96MC5 204 aaPredicted RBP17.09■□□□□ 0.33
GRN-201ENST00000053867 SYT17Q9BSW7 474 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 NT5C3AQ9H0P0 336 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 BCAS3Q9H6U6 928 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 DOCK1Q14185 1865 aa17.09■□□□□ 0.33
GRN-201ENST00000053867 PSMD10O75832 226 aa17.08■□□□□ 0.33
GRN-201ENST00000053867 HMGCS2P54868 508 aa17.08■□□□□ 0.33
GRN-201ENST00000053867 TRIM47Q96LD4 638 aa17.08■□□□□ 0.33
GRN-201ENST00000053867 KDM3AQ9Y4C1 1321 aa17.08■□□□□ 0.33
GRN-201ENST00000053867 RNF225M0QZC1 329 aaPredicted RBP17.08■□□□□ 0.32
GRN-201ENST00000053867 ITGB5P18084 799 aa17.08■□□□□ 0.32
GRN-201ENST00000053867 RPA1P27694 616 aa17.08■□□□□ 0.32
GRN-201ENST00000053867 CEP55Q53EZ4 464 aa17.08■□□□□ 0.32
GRN-201ENST00000053867 COASYQ13057 564 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 COBLL1Q53SF7 1204 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 CENPPQ6IPU0 288 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 CCAR2Q8N163 923 aaKnown RBP17.07■□□□□ 0.32
GRN-201ENST00000053867 EIF2AK1Q9BQI3 630 aaKnown RBP17.07■□□□□ 0.32
GRN-201ENST00000053867 POLD4Q9HCU8 107 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 RNF181Q9P0P0 153 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 VWA5AO00534 786 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 N4BP3O15049 544 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 ZBTB39O15060 712 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 USP2O75604 605 aaPredicted RBP17.07■□□□□ 0.32
GRN-201ENST00000053867 RBL2Q08999 1139 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 PABPC4Q13310 644 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■■■■□ 20.1
GRN-201ENST00000053867 STIM1Q13586 685 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 GPBP1Q86WP2 473 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 CSGALNACT2Q8N6G5 542 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 CPLX3Q8WVH0 158 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 SLC5A5Q92911 643 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 PICK1Q9NRD5 415 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 TBC1D7Q9P0N9 293 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 PCDHA2Q9Y5H9 948 aa17.07■□□□□ 0.32
GRN-201ENST00000053867 CHMP2AO43633 222 aa17.06■□□□□ 0.32
GRN-201ENST00000053867 PHIPQ8WWQ0 1821 aa17.06■□□□□ 0.32
GRN-201ENST00000053867 CCDC47Q96A33 483 aaKnown RBP17.06■□□□□ 0.32
GRN-201ENST00000053867 PANK4Q9NVE7 773 aa17.06■□□□□ 0.32
GRN-201ENST00000053867 WRAP73Q9P2S5 460 aaPredicted RBP17.06■□□□□ 0.32
GRN-201ENST00000053867 RPTORQ8N122 1335 aa17.06■□□□□ 0.32
GRN-201ENST00000053867 MRPS9P82933 396 aaKnown RBP17.05■□□□□ 0.32
GRN-201ENST00000053867 CTTNQ14247 550 aaKnown RBP17.05■□□□□ 0.32
GRN-201ENST00000053867 REPS2Q8NFH8 660 aa17.05■□□□□ 0.32
GRN-201ENST00000053867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.05■□□□□ 0.321e-9■□□□□ 10
GRN-201ENST00000053867 SYTL5Q8TDW5 730 aaPredicted RBP17.05■□□□□ 0.32
GRN-201ENST00000053867 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms