RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 InipQ3TXT3 104 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Garnl3Q3V0G7 1038 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Tdpoz4Q6YCH2 370 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Clic6Q8BHB9 596 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Anks1bQ8BIZ1 1259 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Tbc1d23Q8K0F1 684 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Q8R1Y2 203 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Pcdha3Q91Y16 942 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 PccaQ91ZA3 724 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Polr2dQ9D7M8 142 aaKnown RBP12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Smco2Q9DA21 347 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Mapk8ip1Q9WVI9 707 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Speer3W4VSP1 261 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Ltbp4Q8K4G1 1666 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Hap1O35668 628 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Q3V0E1 1183 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Arid3aQ62431 601 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Nlrp9aQ66X03 949 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Haus7Q8BKT8 364 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Nlrp4aQ8BU40 982 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Rassf9Q8K342 435 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Cfap45Q9D9U9 551 aa12.53□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Ric1Q69ZJ7 1422 aa12.52□□□□□ -0.4
Ssh1-201ENSMUST00000077689 Slf2Q6P9P0 1278 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 IrgcQ8C262 412 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Bcl11bQ99PV8 884 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Appbp2Q9DAX9 585 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Scgb2b20Q9JI02 112 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Atp6v1c1Q9Z1G3 382 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Ddx23D3Z0M9 819 aaKnown RBP12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Ugt1a8D3Z748 530 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Ugt1a10E9PXN7 530 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Dync1i2O88487 612 aaKnown RBP12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Tp53P02340 387 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Exosc10P56960 887 aaKnown RBP12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Ckap2Q3V1H1 664 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Swap70Q6A028 585 aaKnown RBP12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Ncaph2Q8BSP2 607 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 SltmQ8CH25 1031 aaKnown RBP12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Lrrc59Q922Q8 307 aaKnown RBP12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Kif17Q99PW8 1038 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 AmfrQ9R049 643 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Tiam2Q6ZPF3 1715 aa12.52□□□□□ -0.41
Ssh1-201ENSMUST00000077689 DgkiD3YWQ0 1071 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Bin2D3Z6Q9 489 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Phkg1P07934 388 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Psmc4P54775 418 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Gpsm3Q3U1Z5 159 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Krt12Q64291 487 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 HltfQ6PCN7 1003 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Cnot10Q8BH15 744 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Alg3Q8K2A8 438 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Znf131Q8K3J5 619 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Usb1Q91W78 267 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Xpo6Q924Z6 1125 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Trim34aQ99PP6 485 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Krt23Q99PS0 422 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Mis18aQ9CZJ6 204 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Batf3Q9D275 118 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Tmem191cQ9JJB1 302 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Ddx25Q9QY15 484 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Fbxl16A2RT62 479 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Tmcc1Q69ZZ6 649 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Daam1Q8BPM0 1077 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Riok1Q922Q2 567 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Usp11Q99K46 921 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Aldh1b1Q9CZS1 519 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Noc2lQ9WV70 747 aaKnown RBP12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Arhgap33Q80YF9 1305 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Myh13B1AR69 1938 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Gm1141B9EJU1 475 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Zbtb21E9Q444 1094 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Cyp2d34L7N463 504 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Gdap1O88741 358 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 RelaQ04207 549 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Lrfn1Q2WF71 766 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Smcr8Q3UMB5 935 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Islr2Q5RKR3 745 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Lamc2Q61092 1191 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Map2k2Q63932 401 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Mfn1Q811U4 741 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Ublcp1Q8BGR9 318 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Map10Q8BJS7 891 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Tyw3Q8BSA9 257 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Cnot6lQ8VEG6 555 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Tmco1Q921L3 188 aaKnown RBP12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Mfap3Q922T2 349 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Emilin1Q99K41 1017 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Ppil4Q9CXG3 492 aaKnown RBP12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Tubgcp4Q9D4F8 667 aa12.51□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Mrc1Q61830 1456 aa12.5□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Cyp2j7A0A140T8U1 504 aa12.5□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Gm6583E9Q8Z1 469 aa12.5□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Stk10O55098 966 aa12.5□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Pex1Q5BL07 1284 aa12.5□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Sema4bQ62179 823 aa12.5□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Slfnl1Q8BHW9 410 aa12.5□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Ccdc150Q8CDI7 1110 aa12.5□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Lgi2Q8K4Z0 550 aa12.5□□□□□ -0.41
Ssh1-201ENSMUST00000077689 Slc5a4bQ91ZP4 660 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms