RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Mfsd14bQ8CIA9 507 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 TkfcQ8VC30 578 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Slc12a9Q99MR3 914 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Tex19.2Q9D5S1 317 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Serpinb9bQ9DAV6 377 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Vmn1r40Q9EQ46 310 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Eif4enif1Q9EST3 983 aaKnown RBP9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 EdarQ9R187 448 aa9.4□□□□□ -0.9
Ccdc54-201ENSMUST00000062439 Abca17E9PX95 1733 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 H2-T10F6T1I5 379 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Aff1O88573 1216 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Slurp2P0DP59 97 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Myd88P22366 296 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Vav1P27870 845 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Prpf38aQ4FK66 312 aaKnown RBP9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 GpkowQ56A08 488 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Mfsd3Q5U419 412 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Ino80dQ66JY2 873 aaKnown RBP9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Fbxo21Q8VDH1 627 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Eva1aQ91WM6 156 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Nrif2Q921B4 824 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 St5Q924W7 1134 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Rbm43Q99J64 343 aa9.39□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Gm42688A0A0R3P9D1 673 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Ces2gE9PV38 560 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Gm21976J3QNN2 249 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Abl1P00520 1123 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Becn2P0DM65 447 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 SrprbP47758 269 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 PgfP49764 158 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Stat6P52633 837 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Itga4Q00651 1039 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Krtap10-4Q08EG8 221 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Sap25Q1EHW4 186 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Cyp1b1Q64429 543 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Ehbp1Q69ZW3 1231 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Slc39a10Q6P5F6 833 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Sh3tc2Q80VA5 1289 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Zkscan1Q8BGS3 561 aaKnown RBP9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Ccdc142Q8CAI1 738 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Ube2q2Q8K2Z8 378 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 MbipQ99LQ1 341 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Asb11Q9CQ31 323 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Rab27aQ9ERI2 221 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Apobec2Q9WV35 224 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Nos1Q9Z0J4 1429 aa9.38□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Talpid3E9PV87 1520 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Plekhh2Q8C115 1491 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 CercamA3KGW5 592 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Ace3D0G895 737 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Nrg3O35181 713 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Cer1O55233 272 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Aff3P51827 1254 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Nfe2Q07279 373 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Fads2p1Q0VAX3 487 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Rnf180Q3U827 592 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Tmem102Q3UPR7 509 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Lrrc55Q3UY51 311 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Atl2Q6PA06 583 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Adgrd1Q80T32 903 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Rtn4rl1Q8K0S5 445 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 MfrpQ8K480 584 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Nup85Q8R480 656 aaKnown RBP9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Mylk2Q8VCR8 613 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Klf13Q9JJZ6 289 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Abca6Q8K441 1624 aa9.37□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Gli2Q0VGT2 1544 aa9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Hsd3b6O35469 373 aa9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 DaxxO35613 739 aa9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Cdh3P10287 822 aa9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Agbl5Q09M02 886 aa9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Strip2Q8C9H6 844 aa9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Rnf8Q8VC56 488 aa9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Ddx56Q9D0R4 546 aaKnown RBP9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Stag1Q9D3E6 1258 aa9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Abcc5Q9R1X5 1436 aa9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Map3k5O35099 1380 aa9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Mtus2Q3UHD3 1353 aa9.36□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Arhgef10Q8C033 1345 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Dennd4bQ3U1Y4 1499 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 3425401B19RikD3Z1D3 1412 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Tnfrsf11aO35305 625 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Folh1O35409 752 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Pde6aP27664 859 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Grin1P35438 938 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Ppm1bP36993 390 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Cry1P97784 606 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Rasip1Q3U0S6 961 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Uspl1Q3ULM6 1089 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Gm28047Q3US59 414 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Olfml2bQ3V1G4 746 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 DhhQ61488 396 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 RictorQ6QI06 1708 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Pi4k2bQ8CBQ5 469 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Atf7Q8R0S1 413 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Zc3h10Q8R205 435 aaKnown RBP9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 FanclQ9CR14 375 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Dcp2Q9CYC6 422 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Plod3Q9R0E1 741 aa9.35□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Shcbp1Q9Z179 668 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms