RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 IkbkbO88351 757 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 LdhbP16125 334 aaKnown RBP13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Arl4aP61213 200 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ero1aQ8R180 464 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Cgref1Q8R1U2 281 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Satb2Q8VI24 733 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Syf2Q9D198 242 aaKnown RBP13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Rgs12Q8CGE9 1381 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ets1P27577 440 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Spata18Q0P557 537 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gm1604bQ3TRG0 118 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Zfp956Q3UZY6 572 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Spag7Q7TNE3 227 aaKnown RBP13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Mknk2Q8CDB0 459 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Pstpip2Q99M15 334 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Wars2Q9CYK1 360 aa13.37□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gm4841E9QAA8 417 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Nup160Q9Z0W3 1402 aaKnown RBP13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Arhgef9Q3UTH8 516 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Krt39Q6IFX4 482 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Serpinb3dQ6UKZ0 387 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ehd2Q8BH64 543 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Hdac11Q91WA3 347 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Myo3bQ1EG27 1305 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Serpina3iD3Z450 408 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Zbtb45Q52KG4 520 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Dnm3Q8BZ98 863 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Mms19Q9D071 1031 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gm16486A0A1D5RMD1 1434 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Plekhg1F6S200 1446 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gm43638A0A0J9YU36 694 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Acbd5Q5XG73 508 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Zfp449Q8CB76 518 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Rabgef1Q9JM13 491 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Anks1aP59672 1150 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Fbxo11Q7TPD1 930 aaKnown RBP13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Rassf9Q8K342 435 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Slc35f6Q8VE96 372 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Usp19Q3UJD6 1360 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Pabpc4Q6PHQ9 660 aaKnown RBP13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Trim35Q8C006 501 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gpcpd1Q8C0L9 675 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 CnstQ8CBC4 711 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Slc18a1Q8R090 521 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Zscan12Q9Z1D7 501 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Zmym1Q3TJB1 983 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 E2f8Q58FA4 860 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Lyve1Q8BHC0 318 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Anks1bQ8BIZ1 1259 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Zbtb18Q9WUK6 522 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Prrc2bQ7TPM1 1486 aaKnown RBP13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gm21962L7N280 338 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Aoc3O70423 765 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Impdh2P24547 514 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Trpc6Q61143 930 aa13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ipo5Q8BKC5 1097 aaKnown RBP13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Hip1Q8VD75 1029 aaKnown RBP13.36□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Syt2P46097 422 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Yipf3Q3UDR8 347 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Jarid2Q62315 1234 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Tmem132dQ76HP3 1097 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Telo2Q9DC40 840 aaKnown RBP13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Bnip3lQ9Z2F7 218 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Krt24A1L317 512 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gm3248K7N721 186 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Tac1P41539 130 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Clic4Q9QYB1 253 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 CrklP47941 303 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gad1P48318 593 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 NfkbibQ60778 359 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Sval3Q76I99 144 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ripor2Q80U16 1078 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Snip1Q8BIZ6 383 aaKnown RBP13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Setd3Q91WC0 594 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Afg3l1Q920A7 789 aaKnown RBP13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 StrnO55106 780 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Il7P10168 154 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Thumpd3P97770 505 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Naa35Q6PHQ8 725 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ppp2r5dQ91V89 594 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Abcg3Q99P81 650 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Rpa3Q9CQ71 121 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Crlf3Q9Z2L7 442 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Cav1P49817 178 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Flot2Q60634 428 aaKnown RBP13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 AsphQ8BSY0 741 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 4933409G03RikQ8C5U0 320 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Dhx58Q99J87 678 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Cpsf3Q9QXK7 684 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Gprasp2Q8BUY8 826 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 NemfQ8CCP0 1064 aaKnown RBP13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Champ1Q8K327 802 aaKnown RBP13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 RpainQ9CWY9 219 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Serpinb8O08800 374 aaKnown RBP13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Ess2O70279 479 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Foxp2P58463 714 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Asap3Q5U464 904 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Lca5Q80ST9 704 aa13.35□□□□□ -0.27
Vcpip1-201ENSMUST00000057438 Snx2Q9CWK8 519 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms