RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Krt28A6BLY7 462 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Krt78E9Q0F0 1068 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 NfkbieO54910 364 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Fscn2Q32M02 492 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Q3UK37 420 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Zfp90Q61967 636 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Ctdspl2Q8BG15 465 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Osbpl2Q8BX94 484 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Zfp202Q8C879 641 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Cabp7Q91ZM8 215 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Fgd4Q91ZT5 766 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Med24Q99K74 987 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Snx29Q9D3S3 818 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Polr2dQ9D7M8 142 aaKnown RBP9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Sgpp1Q9JI99 430 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 BcamQ9R069 622 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Slc26a4Q9R155 780 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Mia3Q8BI84 1930 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Astn1Q61137 1302 aa9.96□□□□□ -0.81
Ccdc28a-201ENSMUST00000052648 Plxnb3Q9QY40 1902 aa9.96□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Pgk2P09041 417 aa9.96□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Syt2P46097 422 aa9.96□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 StamP70297 548 aa9.96□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Dph1Q5NCQ5 438 aa9.96□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Cln3Q61124 438 aa9.96□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Cdc14aQ6GQT0 603 aa9.96□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Slc17a8Q8BFU8 601 aa9.96□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Socs7Q8VHQ2 579 aa9.96□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Dph6Q9CQ28 267 aa9.96□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Rpap3Q9D706 660 aa9.96□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Timm44O35857 452 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Prom1O54990 867 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Krt18P05784 423 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 PrkczQ02956 592 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Lmntd2Q0VET5 664 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Rasip1Q3U0S6 961 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Mansc4Q3UU94 337 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Antxr2Q6DFX2 487 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Clec16aQ80U30 1036 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Nemp2Q8CB65 421 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 PdgfcQ8CI19 345 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Slc25a38Q91XD8 326 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Add3Q9QYB5 706 aaKnown RBP9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Ep400Q8CHI8 3072 aaKnown RBP9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Serpina16D3Z660 418 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Zscan29E9Q5B4 869 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Gml2G5E8L7 176 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Vmn2r71L7N2D8 855 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Il4rP16382 810 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Nf2P46662 596 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Pcmtd1P59913 357 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Atp9bP98195 1146 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Ly9Q01965 654 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Lrrc14bQ3UJB3 510 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Zfp957Q3UT76 567 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Gas2l3Q3UWW6 683 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Trak2Q6P9N8 913 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Krt9Q6RHW0 743 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 GypcQ78HU7 95 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Aoc2Q812C9 757 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Zdhhc14Q8BQQ1 489 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Bcas3Q8CCN5 928 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Ddx41Q91VN6 622 aaKnown RBP9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Adgrf4Q9D2L6 698 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 PdcQ9QW08 244 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Spint1Q9R097 507 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Hic1Q9R1Y5 733 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Mrvi1Q9WUX5 899 aaKnown RBP9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Sh3bgrQ9WUZ7 214 aa9.95□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Gm9992B2RWK3 458 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Nck2O55033 380 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 SsbP32067 415 aaKnown RBP9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Psmc2P46471 433 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Lpar1P61793 364 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 YdjcQ14BV6 310 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Gpatch11Q3UFS4 262 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Slc2a13Q3UHK1 637 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 RragbQ6NTA4 374 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Unc93aQ710D3 458 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Cyfip1Q7TMB8 1253 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Nim1kQ8BHI9 436 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Sun2Q8BJS4 731 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Trim47Q8C0E3 641 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 E2f4Q8R0K9 410 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Kcnc4Q8R1C0 628 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Hdhd5Q91WM2 419 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Dis3Q9CSH3 958 aaKnown RBP9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Krtap5-3Q9D226 196 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Cntn6Q9JMB8 1028 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Wdr33Q8K4P0 1330 aaKnown RBP9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Wdr81Q5ND34 1934 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Acad12D3Z7X0 555 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Olfr67F8VPJ8 320 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Gm3138K7N754 218 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Mt-CybP00158 381 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Hoxd10P28359 340 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Kif4P33174 1231 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Setd4P58467 439 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Islr2Q5RKR3 745 aa9.94□□□□□ -0.82
Ccdc28a-201ENSMUST00000052648 Foxd1Q61345 456 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms