RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 VillQ91YD6 859 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Hps4Q99KG7 671 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Hyou1Q9JKR6 999 aaKnown RBP12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Nme8Q715T0 586 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Bag2Q91YN9 210 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Gpihbp1Q9D1N2 228 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 ErmapQ9JLN5 566 aa12.39□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ppp1r9aH3BJD6 1292 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 GssP51855 474 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Sec23aQ01405 765 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Dpcr1Q3TNW5 500 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ddx3xQ62167 662 aaKnown RBP12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 SugctQ7TNE1 436 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 FtoQ8BGW1 502 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Erp44Q9D1Q6 406 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Nap1l5Q9JJF0 156 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Atp2c2A7L9Z8 944 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Bnip3O55003 187 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Chmp6P0C0A3 200 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Sem1P60897 70 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ppp1r12cQ3UMT1 782 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Lilrb4Q64281 335 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 E2f4Q8R0K9 410 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ppp2r5dQ91V89 594 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Gm2030D3Z7C4 212 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Uhmk1P97343 419 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Sap30bpQ02614 308 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 LrmpQ60664 539 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Serpinb6Q60854 378 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Krt14Q61781 484 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Spata17Q9D552 379 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ccdc124Q9D8X2 217 aaKnown RBP12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Riok3Q9DBU3 519 aaKnown RBP12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Sertad1Q9JL10 236 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Fmnl1Q9JL26 1094 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Gfpt2Q9Z2Z9 682 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Gm28036V9GXJ1 658 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Myo5bP21271 1818 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 DohhA0A1Y7VJ29 135 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 AgtP11859 477 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Eya3P97480 510 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Psmd1Q3TXS7 953 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tmem35bQ3U0Y2 150 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Cracr2bQ80ZJ8 394 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 ZgpatQ8VDM1 511 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Pcdha5Q91Y15 934 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tmem192Q9CXT7 266 aa12.38□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Lrig2Q52KR2 1054 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ranbp17Q99NF8 1088 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Calr3Q9D9Q6 380 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ift172Q6VH22 1749 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ano3A2AHL1 981 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Kcna1P16388 495 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Slc2a13Q3UHK1 637 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Sh3d21Q7TSG5 549 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Slf1Q8R3P9 1054 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Znf654Q9DAU9 571 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Snx1Q9WV80 522 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 GsdmeQ9Z2D3 512 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Casp8O89110 480 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Lmnb2P21619 596 aaKnown RBP12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Kif22Q3V300 660 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Prr18Q6PAN7 307 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Krt9Q6RHW0 743 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 OplahQ8K010 1288 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Vwa5aQ99KC8 793 aaKnown RBP12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Rabgef1Q9JM13 491 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Frmd7A2AD83 703 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 CraddO88843 199 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Eno1P17182 434 aaKnown RBP12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 IvlP48997 467 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ksr1Q61097 873 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Znf280dQ68FE8 974 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ppp2r2aQ6P1F6 447 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Usp17leQ7M764 540 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Klhl29Q80T74 875 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Cog5Q8C0L8 829 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Msantd4Q91YU3 345 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 AticQ9CWJ9 592 aaKnown RBP12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 LrmdaQ9D9B4 229 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 1700109H08RikQ9D9C0 210 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tbx18Q9EPZ6 613 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Adgrf5G5E8Q8 1348 aa12.37□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Guca2bO09051 106 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Stat4P42228 749 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Mybl1P51960 751 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Kcnb1Q03717 857 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ccdc160Q3UYG1 323 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Champ1Q8K327 802 aaKnown RBP12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Cfap53Q9D439 514 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Cabp5Q9JLK3 173 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Myl7Q9QVP4 175 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Tex21Q9R0U9 575 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Alppl2P24823 529 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 AdalQ80SY6 360 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Cnot10Q8BH15 744 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Ddx19bQ8BZY3 494 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Stap2Q8R0L1 411 aa12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Plekha7Q3UIL6 1118 aaKnown RBP12.36□□□□□ -0.43
Topbp1-201ENSMUST00000035164 Sf3b2Q3UJB0 878 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms